RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RAD7	P06779	565 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	CLB6	P32943	380 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	END3	P39013	349 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	SHQ1	P40486	507 aa	Predicted RBP	2.61	□□□□□ -1.99
UBS1	YBR165W	PIR5	P46999	287 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	COX16	P47081	118 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	YPT32	P51996	222 aa	Known RBP	2.61	□□□□□ -1.99
UBS1	YBR165W	TPN1	P53099	579 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	PRO2	P54885	456 aa	Known RBP	2.61	□□□□□ -1.99
UBS1	YBR165W	YLR297W	Q05899	129 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	YPR064W	Q12492	139 aa		2.61	□□□□□ -1.99
UBS1	YBR165W	RIB4	P50861	169 aa	Predicted RBP	2.6	□□□□□ -1.99
UBS1	YBR165W	TAZ1	Q06510	381 aa		2.6	□□□□□ -1.99
UBS1	YBR165W	RRP42	Q12277	265 aa	Predicted RBP	2.6	□□□□□ -1.99
UBS1	YBR165W	RPL5	P26321	297 aa	Known RBP	2.59	□□□□□ -1.99
UBS1	YBR165W	SPL2	P38839	148 aa		2.59	□□□□□ -1.99
UBS1	YBR165W	SUR2	P38992	349 aa		2.59	□□□□□ -1.99
UBS1	YBR165W	LOH1	P47055	219 aa		2.59	□□□□□ -1.99
UBS1	YBR165W	SSU72	P53538	206 aa	Predicted RBP	2.59	□□□□□ -1.99
UBS1	YBR165W	DBP6	P53734	629 aa	Known RBP	2.59	□□□□□ -1.99
UBS1	YBR165W	MRS2	Q01926	470 aa		2.59	□□□□□ -1.99
UBS1	YBR165W	YMR111C	Q04461	462 aa	Predicted RBP	2.59	□□□□□ -1.99
UBS1	YBR165W	SIA1	Q12212	622 aa		2.59	□□□□□ -1.99
UBS1	YBR165W	CAR2	P07991	424 aa	Known RBP	2.58	□□□□□ -2
UBS1	YBR165W	RRT12	P25381	491 aa		2.58	□□□□□ -2
UBS1	YBR165W	SWD2	P36104	329 aa	Predicted RBP	2.58	□□□□□ -2
UBS1	YBR165W	AVT7	P40501	490 aa		2.58	□□□□□ -2
UBS1	YBR165W	SWT21	P53873	357 aa	Predicted RBP	2.58	□□□□□ -2
UBS1	YBR165W	FCF1	Q05498	189 aa	Predicted RBP	2.58	□□□□□ -2
UBS1	YBR165W	YLL007C	Q07799	665 aa		2.58	□□□□□ -2
UBS1	YBR165W	PLB3	Q08108	686 aa		2.58	□□□□□ -2
UBS1	YBR165W	VPS68	Q12016	184 aa		2.58	□□□□□ -2
UBS1	YBR165W	AGC1	Q12482	902 aa		2.58	□□□□□ -2
UBS1	YBR165W	RPL26A	P05743	127 aa	Known RBP	2.57	□□□□□ -2
UBS1	YBR165W	YKL063C	P35725	167 aa		2.57	□□□□□ -2
UBS1	YBR165W	YJR141W	P47172	347 aa	Predicted RBP	2.57	□□□□□ -2
UBS1	YBR165W	RPL26B	P53221	127 aa	Known RBP	2.57	□□□□□ -2
UBS1	YBR165W	YPL077C	Q02831	240 aa		2.57	□□□□□ -2
UBS1	YBR165W	YML018C	Q03730	393 aa		2.57	□□□□□ -2
UBS1	YBR165W	YOR283W	Q12040	230 aa	Known RBP	2.57	□□□□□ -2
UBS1	YBR165W	RPC37	P36121	282 aa		2.56	□□□□□ -2
UBS1	YBR165W	CGI121	Q03705	181 aa	Known RBP	2.56	□□□□□ -2
UBS1	YBR165W	DPP1	Q05521	289 aa		2.56	□□□□□ -2
UBS1	YBR165W	YOR114W	Q12219	294 aa		2.56	□□□□□ -2
UBS1	YBR165W	ATP6	P00854	259 aa		2.55	□□□□□ -2
UBS1	YBR165W	SUA5	P32579	426 aa		2.55	□□□□□ -2
UBS1	YBR165W	SEN34	P39707	275 aa		2.55	□□□□□ -2
UBS1	YBR165W	GTO1	P48239	356 aa		2.55	□□□□□ -2
UBS1	YBR165W	VOA1	P53262	265 aa		2.55	□□□□□ -2
UBS1	YBR165W	BEM2	P39960	2167 aa	Known RBP	2.54	□□□□□ -2
UBS1	YBR165W	DPM1	P14020	267 aa	Known RBP	2.54	□□□□□ -2
UBS1	YBR165W	TFS1	P14306	219 aa		2.54	□□□□□ -2
UBS1	YBR165W	SAR1	P20606	190 aa	Known RBP	2.54	□□□□□ -2
UBS1	YBR165W	COT1	P32798	439 aa		2.54	□□□□□ -2
UBS1	YBR165W	YDR089W	P38966	869 aa		2.54	□□□□□ -2
UBS1	YBR165W	LOC1	P43586	204 aa	Predicted RBP	2.54	□□□□□ -2
UBS1	YBR165W	CTS2	Q06350	511 aa		2.54	□□□□□ -2
UBS1	YBR165W	TRX1	P22217	103 aa	Known RBP	2.53	□□□□□ -2
UBS1	YBR165W	RPS0A	P32905	252 aa	Known RBP	2.53	□□□□□ -2
UBS1	YBR165W	COY1	P34237	679 aa		2.53	□□□□□ -2
UBS1	YBR165W	POP8	P38208	133 aa		2.53	□□□□□ -2
UBS1	YBR165W	COG7	P53195	279 aa		2.53	□□□□□ -2
UBS1	YBR165W	ABZ2	Q03266	374 aa		2.53	□□□□□ -2
UBS1	YBR165W	RRG8	Q06109	277 aa		2.53	□□□□□ -2
UBS1	YBR165W	CUR1	Q06469	252 aa		2.53	□□□□□ -2
UBS1	YBR165W	VAC14	Q06708	880 aa		2.53	□□□□□ -2
UBS1	YBR165W	RTC5	Q12108	567 aa	Known RBP	2.53	□□□□□ -2
UBS1	YBR165W	PAN1	P32521	1480 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	GCD2	P12754	651 aa	Predicted RBP	2.52	□□□□□ -2.01
UBS1	YBR165W	ATG15	P25641	520 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	KRE6	P32486	720 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	SPT4	P32914	102 aa	Predicted RBP	2.52	□□□□□ -2.01
UBS1	YBR165W	PHO89	P38361	574 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	RPE1	P46969	238 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	YJR146W	P47174	117 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	NBP1	P52919	319 aa	Predicted RBP	2.52	□□□□□ -2.01
UBS1	YBR165W	MYO5	Q04439	1219 aa	Known RBP	2.52	□□□□□ -2.01
UBS1	YBR165W	ASR1	Q06834	288 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	ISD11	Q6Q560	94 aa		2.52	□□□□□ -2.01
UBS1	YBR165W	ERG2	P32352	222 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	CAT2	P32796	670 aa	Known RBP	2.51	□□□□□ -2.01
UBS1	YBR165W	YHI9	P38765	294 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	DSK2	P48510	373 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	YMR209C	Q03648	457 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	RDS3	Q06835	107 aa	Predicted RBP	2.51	□□□□□ -2.01
UBS1	YBR165W	TY3A-G	Q12173	290 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	YBL112C	Q3E7Y4	105 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	TY3A-I	Q99219	290 aa		2.51	□□□□□ -2.01
UBS1	YBR165W	NUP157	P40064	1391 aa	Known RBP	2.5	□□□□□ -2.01
UBS1	YBR165W	PET494	P07390	489 aa	Predicted RBP	2.5	□□□□□ -2.01
UBS1	YBR165W	TOM40	P23644	387 aa	Known RBP	2.5	□□□□□ -2.01
UBS1	YBR165W	MNN9	P39107	395 aa	Known RBP	2.5	□□□□□ -2.01
UBS1	YBR165W	GRH1	Q04410	372 aa	Known RBP	2.5	□□□□□ -2.01
UBS1	YBR165W	TAF9	Q05027	157 aa		2.5	□□□□□ -2.01
UBS1	YBR165W	YOR268C	Q08734	132 aa		2.5	□□□□□ -2.01
UBS1	YBR165W	OPI1	P21957	404 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	RPC25	P35718	212 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	VPS45	P38932	577 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	AGP3	P43548	558 aa		2.49	□□□□□ -2.01
UBS1	YBR165W	MND1	P53102	219 aa		2.49	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 84.6 ms