RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ZDBF2Q9HCK1 2354 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 KMT2EQ8IZD2 1858 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 ARL5CA6NH57 179 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 NRP1O14786 923 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 ALDH2P05091 517 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 SSBP05455 408 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 EPCAMP16422 314 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 MLH1P40692 756 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 HMGN5P82970 282 aaKnown RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 NCBP1Q09161 790 aaKnown RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 KANK3Q6NY19 840 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 CDR2LQ86X02 465 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 C12orf76Q8N812 135 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 FAM184AQ8NB25 1140 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 CCDC51Q96ER9 411 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 ZSCAN31Q96LW9 406 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 ZFP42Q96MM3 310 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 GAD1Q99259 594 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 TMEM175Q9BSA9 504 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 APOL6Q9BWW8 343 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 NXF3Q9H4D5 531 aaKnown RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 UBN1Q9NPG3 1134 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 FAN1Q9Y2M0 1017 aa15.45■□□□□ 0.06
LINC00339-211ENST00000641009 ARIH1Q9Y4X5 557 aaPredicted RBP15.45■□□□□ 0.06
LINC00339-211ENST00000641009 LRRIQ4A6NIV6 560 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 WEE2P0C1S8 567 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 RBM25P49756 843 aaKnown RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 GIT2Q14161 759 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 NBR1Q14596 966 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 PTPN14Q15678 1187 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 RARS2Q5T160 578 aaKnown RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 CES5AQ6NT32 575 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 NOSTRINQ8IVI9 506 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 POLR3CQ9BUI4 534 aaPredicted RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 TRIM6Q9C030 488 aaPredicted RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 ADAM7Q9H2U9 754 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 POMKQ9H5K3 350 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 SH2B1Q9NRF2 756 aaPredicted RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 MIOSQ9NXC5 875 aa15.44■□□□□ 0.06
LINC00339-211ENST00000641009 DBR1Q9UK59 544 aaKnown RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 PRG3Q9Y2Y8 225 aaPredicted RBP15.44■□□□□ 0.06
LINC00339-211ENST00000641009 AKAP5P24588 427 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 RPA1P27694 616 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 OR1G1P47890 313 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 SCNN1GP51170 649 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 ZXDAP98168 799 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 ITIH3Q06033 890 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 ORC2Q13416 577 aaPredicted RBP15.43■□□□□ 0.06
LINC00339-211ENST00000641009 COLGALT2Q8IYK4 626 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 MCPH1Q8NEM0 835 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 SLC22A17Q8WUG5 538 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 NACC1Q96RE7 527 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 MARCH5Q9NX47 278 aa15.43■□□□□ 0.06
LINC00339-211ENST00000641009 F8W810 466 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 INPPL1O15357 1258 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 NPTXRO95502 500 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 SLC27A1Q6PCB7 646 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 TRIM67Q6ZTA4 783 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 TAS1R1Q7RTX1 841 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 ERMNQ8TAM6 284 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 FEZF2Q8TBJ5 459 aa15.42■□□□□ 0.06
LINC00339-211ENST00000641009 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 ARHGEF35A5YM69 484 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 TMEM221A6NGB7 291 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 M0R296 226 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 C2CD2LO14523 706 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 LILRB3O75022 631 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 CNPP09543 421 aaKnown RBP15.41■□□□□ 0.06
LINC00339-211ENST00000641009 DSC1Q08554 894 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 ECM1Q16610 540 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 CDCA2Q69YH5 1023 aaPredicted RBP15.41■□□□□ 0.06
LINC00339-211ENST00000641009 PADI6Q6TGC4 694 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 C4orf32Q8N8J7 132 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 BSNDQ8WZ55 320 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 NECTIN4Q96NY8 510 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 KLHL5Q96PQ7 755 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 EMILIN2Q9BXX0 1053 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 MRPL17Q9NRX2 175 aaKnown RBP15.41■□□□□ 0.06
LINC00339-211ENST00000641009 DZANK1Q9NVP4 752 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 KLK14Q9P0G3 267 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 STK39Q9UEW8 545 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 NOL7Q9UMY1 257 aaKnown RBP15.41■□□□□ 0.06
LINC00339-211ENST00000641009 GIT1Q9Y2X7 761 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 CITO14578 2027 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 DOCK6Q96HP0 2047 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 VWA8A3KMH1 1905 aa15.41■□□□□ 0.06
LINC00339-211ENST00000641009 SOD2P04179 222 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 KLRC2P26717 231 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 MTHFRP42898 656 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 TRAPPC10P48553 1259 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 TOB1P50616 345 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-211ENST00000641009 CLCN4P51793 760 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
LINC00339-211ENST00000641009 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms