RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 DNAJC25-GNG10A0A024R161 153 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 A0A0U1RQJ8 604 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 ANKRD62A6NC57 917 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 RCCD1A6NED2 376 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 BUB1O43683 1085 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 STBD1O95210 358 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 TMEM253P0C7T8 217 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 YBX3P16989 372 aaKnown RBP eCLIP8.99□□□□□ -0.97
PNKP-231ENST00000640501 ARL2P36404 184 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 PDE6CP51160 858 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 GPC3P51654 580 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 CLCN6P51797 869 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 TNNC1P63316 161 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 FAM193AP78312 1265 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 GCNT1Q02742 428 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 CYP24A1Q07973 514 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 GRM1Q13255 1194 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 PPP2R5EQ16537 467 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 ARHGAP44Q17R89 818 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 CELF3Q5SZQ8 465 aaKnown RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 HDXQ7Z353 690 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 ANKRD23Q86SG2 305 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 ZNF677Q86XU0 584 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 C2orf69Q8N8R5 385 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 PARD3BQ8TEW8 1205 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 ATP8B4Q8TF62 1192 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 U2AF1L4Q8WU68 220 aaKnown RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 ATRIPQ8WXE1 791 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 CCDC127Q96BQ5 260 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 TRIM11Q96F44 468 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 CLMNQ96JQ2 1002 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 PARK7Q99497 189 aaKnown RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 AGPAT1Q99943 283 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 MRPL4Q9BYD3 311 aaKnown RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 PARD6BQ9BYG5 372 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 SEPT11Q9NVA2 429 aaKnown RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 RAB20Q9NX57 234 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 ERAP1Q9NZ08 941 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 RBPJLQ9UBG7 517 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 AGO2Q9UKV8 859 aaKnown RBP8.99□□□□□ -0.97
PNKP-231ENST00000640501 RAB21Q9UL25 225 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 STYXL1Q9Y6J8 313 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 CAPN6Q9Y6Q1 641 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 DOCK5Q9H7D0 1870 aa8.99□□□□□ -0.97
PNKP-231ENST00000640501 GSTTP1A0A1W2PQM5 241 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TMEM150BA6NC51 233 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TULP1O00294 542 aaPredicted RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 MAGEB2O15479 319 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 CLDN3O15551 220 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 ADCY3O60266 1144 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 HBP1O60381 514 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 RTN2O75298 545 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 LGR5O75473 907 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 PALMO75781 387 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 CNMDO75829 334 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 ABL1P00519 1130 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 HOXC6P09630 235 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 ZBTB48P10074 688 aaPredicted RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 TXNP10599 105 aaKnown RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 GZMAP12544 262 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TNNI1P19237 187 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TBXAS1P24557 533 aaPredicted RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 KLRC1P26715 233 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TMOD1P28289 359 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 USP8P40818 1118 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 SP2Q02086 613 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 MAP2K1Q02750 393 aaPredicted RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 NAA30Q147X3 362 aaPredicted RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 PSMD6Q15008 389 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 KYAT1Q16773 422 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 ZNF484Q5JVG2 852 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 MEI1Q5TIA1 1274 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 DPY19L2P1Q6NXN4 242 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 PEX26Q7Z412 305 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 APBB1IPQ7Z5R6 666 aaPredicted RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 CBWD2Q8IUF1 395 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 PPM1KQ8N3J5 372 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 MMGT1Q8N4V1 131 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 MSL3Q8N5Y2 521 aaKnown RBP8.98□□□□□ -0.97
PNKP-231ENST00000640501 GOLGA6L1Q8N7Z2 621 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 CNKSR2Q8WXI2 1034 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 RFFLQ8WZ73 363 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 SAAL1Q96ER3 474 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 PKNOX2Q96KN3 472 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 CAPZA3Q96KX2 299 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 SPATA33Q96N06 139 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 SH2D3AQ9BRG2 576 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 FAM213AQ9BRX8 229 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 MSTO1Q9BUK6 570 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 PLVAPQ9BX97 442 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TMEM117Q9H0C3 514 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 XPNPEP1Q9NQW7 623 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 LCMT1Q9UIC8 334 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 AMFRQ9UKV5 643 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 TRPC6Q9Y210 931 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 DUSP10Q9Y6W6 482 aa8.98□□□□□ -0.97
PNKP-231ENST00000640501 COL1A2P08123 1366 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms