RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 EPHX4Q8IUS5 362 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 REXO1L1PQ8IX06 675 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 LSMEM1Q8N8F7 131 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SNX25Q9H3E2 840 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 PTPDC1A2A3K4 754 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 GARTP22102 1010 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 PSMC2P35998 433 aaKnown RBP4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SLC1A1P43005 524 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SLC9A3P48764 834 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 USP46P62068 366 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 DMC1Q14565 340 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 ZNF540Q8NDQ6 660 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 ADAM32Q8TC27 787 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 C11orf24Q96F05 449 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SLC40A1Q9NP59 571 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC87Q9NVE4 849 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 COX16Q9P0S2 106 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SNX9Q9Y5X1 595 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 ZNF638Q14966 1978 aaKnown RBP4.58□□□□□ -1.68
SCN3A-209ENST00000639244 RB1CC1Q8TDY2 1594 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 J3KRW8 73 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 CYP27B1O15528 508 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 TBC1D8O95759 1140 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 RAD52P43351 418 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 IST1P53990 364 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 CALCOCO2Q13137 446 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 PLD1Q13393 1074 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 OSTM1Q86WC4 334 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 PASD1Q8IV76 773 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 MTMR8Q96EF0 704 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 STAMBPL1Q96FJ0 436 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 PCDHB6Q9Y5E3 794 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 PCDHB4Q9Y5E5 795 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 VWA3AA6NCI4 1184 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SOWAHDA6NJG2 315 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 COG7P83436 770 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 KRT17Q04695 432 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 IFI16Q16666 785 aaKnown RBP4.58□□□□□ -1.68
SCN3A-209ENST00000639244 HADHQ16836 314 aaKnown RBP4.58□□□□□ -1.68
SCN3A-209ENST00000639244 CDONQ4KMG0 1287 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 OLFML2BQ68BL8 750 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 IPMKQ8NFU5 416 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 METTL6Q8TCB7 284 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 MLPHQ9BV36 600 aaPredicted RBP4.58□□□□□ -1.68
SCN3A-209ENST00000639244 RUBCNLQ9H714 662 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 IFT22Q9H7X7 185 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 CRLF2Q9HC73 371 aa4.58□□□□□ -1.68
SCN3A-209ENST00000639244 SETD5Q9C0A6 1442 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 OR6C74A6NCV1 312 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CAPN14A8MX76 684 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ZAP70P43403 619 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 NEK3P51956 506 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 GPR85P60893 370 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CTDSPL2Q05D32 466 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 STK32AQ8WU08 396 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 DDX23Q9BUQ8 820 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 NYXQ9GZU5 481 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 EBF2Q9HAK2 575 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ITIH6Q6UXX5 1313 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ARHGEF37A1IGU5 675 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CHGBP05060 677 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 MYL6P60660 151 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 POLR2GP62487 172 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 MXD4Q14582 209 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 BCL2A1Q16548 175 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CDH24Q86UP0 819 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 STARD8Q92502 1023 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TTC17Q96AE7 1141 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CCSER1Q9C0I3 900 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PAQR5Q9NXK6 330 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ARHGAP31Q2M1Z3 1444 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TMEM114B3SHH9 223 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ALG1L2C9J202 215 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 NOL3O60936 208 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SYT1P21579 422 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 MAPK1P28482 360 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SOX6P35712 828 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 HADHBP55084 474 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 STX1BP61266 288 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CYP4F8P98187 520 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 GALNT1Q10472 559 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TRIM14Q14142 442 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 MDH1BQ5I0G3 518 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PLA2G4DQ86XP0 818 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 RASSF5Q8WWW0 418 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 NUDCD1Q96RS6 583 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 L2HGDHQ9H9P8 463 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 POLR2MP0CAP2 368 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TKTL1P51854 596 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 CACNB2Q08289 660 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SLC14A2Q15849 920 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 LONRF2Q1L5Z9 754 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PM20D2Q8IYS1 436 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 SLC39A13Q96H72 371 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 BARD1Q99728 777 aaKnown RBP4.57□□□□□ -1.68
SCN3A-209ENST00000639244 ISCA1Q9BUE6 129 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 LY9Q9HBG7 655 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 TNFRSF10DQ9UBN6 386 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 UBN2Q6ZU65 1347 aa4.57□□□□□ -1.68
SCN3A-209ENST00000639244 PHACTR2O75167 634 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms