RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 RASIP1Q5U651 963 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 ISM2Q6H9L7 571 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 TWF2Q6IBS0 349 aaKnown RBP21.3■■□□□ 1
HLA-A-209ENST00000638375 SLC39A4Q6P5W5 647 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 STXBP4Q6ZWJ1 553 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 SMYD4Q8IYR2 804 aaPredicted RBP21.3■■□□□ 1
HLA-A-209ENST00000638375 CCDC51Q96ER9 411 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 ACCSQ96QU6 501 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 EIF2AQ9BY44 585 aaKnown RBP21.3■■□□□ 1
HLA-A-209ENST00000638375 PTPRHQ9HD43 1115 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 ZMYM2Q9UBW7 1377 aa21.3■■□□□ 1
HLA-A-209ENST00000638375 UBE4BO95155 1302 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 MICAL3Q7RTP6 2002 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 ZBBXA8MT70 800 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 TISP43B9A030 160 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 BIN1O00499 593 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 N4BP3O15049 544 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 EFCAB14O75071 495 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 BMP6P22004 513 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 PROZP22891 400 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 BMP8BP34820 402 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 DEFB103AP81534 67 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 MORC3Q14149 939 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 CCDC183Q5T5S1 534 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 ZNF658Q5TYW1 1059 aaPredicted RBP21.29■■□□□ 1
HLA-A-209ENST00000638375 ZPBP2Q6X784 338 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 RBM43Q6ZSC3 357 aaKnown RBP21.29■■□□□ 1
HLA-A-209ENST00000638375 NELFCDQ8IXH7 590 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 BICD1Q96G01 975 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 ZBTB45Q96K62 511 aaPredicted RBP21.29■■□□□ 1
HLA-A-209ENST00000638375 TRAIPQ9BWF2 469 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 PRO3102Q9H379 93 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 C1orf112Q9NSG2 853 aa21.29■■□□□ 1
HLA-A-209ENST00000638375 ANKRD63C9JTQ0 380 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 HNRNPDLO14979 420 aaKnown RBP21.28■■□□□ 1
HLA-A-209ENST00000638375 LIG4P49917 911 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 FAM189BP81408 668 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 CAVIN1Q6NZI2 390 aaKnown RBP21.28■■□□□ 1
HLA-A-209ENST00000638375 SLC27A1Q6PCB7 646 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 CHRDL2Q6WN34 429 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 SLC24A5Q71RS6 500 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 MYOCDQ8IZQ8 938 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 HAPLN2Q9GZV7 340 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 FAM105AQ9NUU6 356 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 EXOC7Q9UPT5 735 aa21.28■■□□□ 1
HLA-A-209ENST00000638375 A0A0U1RQF3 1178 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 TOM1L1O75674 476 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 NPTXRO95502 500 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 SYCP3Q8IZU3 236 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 RNPC3Q96LT9 517 aaKnown RBP21.27■■□□□ 1
HLA-A-209ENST00000638375 CDT1Q9H211 546 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 TMEM206Q9H813 350 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 MAPK8IP1Q9UQF2 711 aa21.27■■□□□ 1
HLA-A-209ENST00000638375 ATF7P17544 494 aaPredicted RBP21.26■□□□□ 0.99
HLA-A-209ENST00000638375 IBSPP21815 317 aaPredicted RBP21.26■□□□□ 0.99
HLA-A-209ENST00000638375 KCNJ6P48051 423 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 RAB27AP51159 221 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 ZNF568Q3ZCX4 644 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 MPZL3Q6UWV2 235 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 ECHDC2Q86YB7 292 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 CRIPAKQ8N1N5 446 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 GUF1Q8N442 669 aaKnown RBP21.26■□□□□ 0.99
HLA-A-209ENST00000638375 TRIML1Q8N9V2 468 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 SMG8Q8ND04 991 aaKnown RBP21.26■□□□□ 0.99
HLA-A-209ENST00000638375 ANKFY1Q9P2R3 1169 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 IPPQ9Y573 584 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 PCDHB2Q9Y5E7 798 aa21.26■□□□□ 0.99
HLA-A-209ENST00000638375 TGFB1I1O43294 461 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 ZNF623O75123 536 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 AMHP03971 560 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 ADSSP30520 456 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 PRCPP42785 496 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 MCL1Q07820 350 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 KNOP1Q1ED39 458 aaKnown RBP21.25■□□□□ 0.99
HLA-A-209ENST00000638375 DCAF4L1Q3SXM0 396 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 COBLL1Q53SF7 1204 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 TMCO2Q7Z6W1 182 aaPredicted RBP21.25■□□□□ 0.99
HLA-A-209ENST00000638375 ZBTB33Q86T24 672 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 ZNF598Q86UK7 904 aaKnown RBP21.25■□□□□ 0.99
HLA-A-209ENST00000638375 ADPGKQ9BRR6 497 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 TCHPQ9BT92 498 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 GBP3Q9H0R5 595 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 MTIF3Q9H2K0 278 aaKnown RBP21.25■□□□□ 0.99
HLA-A-209ENST00000638375 KCTD10Q9H3F6 313 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
HLA-A-209ENST00000638375 HES2Q9Y543 173 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 STYXL1Q9Y6J8 313 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 SLC4A7Q9Y6M7 1214 aa21.25■□□□□ 0.99
HLA-A-209ENST00000638375 MEIS3P2A8K0S8 358 aa21.24■□□□□ 0.99
HLA-A-209ENST00000638375 CLDN3O15551 220 aa21.24■□□□□ 0.99
HLA-A-209ENST00000638375 HARSP12081 509 aaKnown RBP21.24■□□□□ 0.99
HLA-A-209ENST00000638375 CD44P16070 742 aaKnown RBP21.24■□□□□ 0.99
HLA-A-209ENST00000638375 NOLC1Q14978 699 aaKnown RBP eCLIP21.24■□□□□ 0.997e-8■□□□□ 8.3
HLA-A-209ENST00000638375 SKOR2Q2VWA4 1001 aaPredicted RBP21.24■□□□□ 0.99
HLA-A-209ENST00000638375 MRPL10Q7Z7H8 261 aaKnown RBP21.24■□□□□ 0.99
HLA-A-209ENST00000638375 CEP120Q8N960 986 aa21.24■□□□□ 0.99
HLA-A-209ENST00000638375 TOP1MTQ969P6 601 aa21.24■□□□□ 0.99
HLA-A-209ENST00000638375 GTPBP4Q9BZE4 634 aaKnown RBP21.24■□□□□ 0.99
HLA-A-209ENST00000638375 TRIM6Q9C030 488 aaPredicted RBP21.24■□□□□ 0.99
HLA-A-209ENST00000638375 RNF39Q9H2S5 420 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms