RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 MCF2P10911 925 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 TRIM21P19474 475 aaKnown RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 CCND3P30281 292 aaPredicted RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 KCNJ6P48051 423 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 CYP2J2P51589 502 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 CLCN3P51790 818 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 CRYBB1P53674 252 aaPredicted RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 MCL1Q07820 350 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 KCNA1Q09470 495 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 DCAF4L1Q3SXM0 396 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 MPZL3Q6UWV2 235 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 TMC6Q7Z403 805 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 USP38Q8NB14 1042 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 NAP1L5Q96NT1 182 aaPredicted RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 PANX2Q96RD6 677 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 MCOLN1Q9GZU1 580 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 VPS16Q9H269 839 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 PLCB1Q9NQ66 1216 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 SETD4Q9NVD3 440 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 AGO2Q9UKV8 859 aaKnown RBP11.25□□□□□ -0.61
LINC00598-216ENST00000638163 MROH7Q68CQ1 1323 aa11.25□□□□□ -0.61
LINC00598-216ENST00000638163 ZSWIM8A7E2V4 1837 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 SIP14410 1827 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 A0A0U1RQG5 324 aaPredicted RBP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 AKR1B15C9JRZ8 316 aaPredicted RBP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 CLIC2O15247 247 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 OGTO15294 1046 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 CCP110O43303 1012 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 ZC3H11AO75152 810 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 IL18RAPO95256 599 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 PGK1P00558 417 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 VAMP7P51809 220 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 ACLYP53396 1101 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 BEX3Q00994 111 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 MBTD1Q05BQ5 628 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 PTK7Q13308 1070 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 KCNA10Q16322 511 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 HSP90AA4PQ58FG1 418 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 ATF7IP2Q5U623 682 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 SERINC5Q86VE9 423 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 NT5DC4Q86YG4 428 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 CD302Q8IX05 232 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 TRAPPC12Q8WVT3 735 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 SLC35C1Q96A29 364 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 BORCS6Q96GS4 357 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 MFSD14AQ96MC6 490 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 FNBP1Q96RU3 617 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 MSTO1Q9BUK6 570 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 KIFC3Q9BVG8 833 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
LINC00598-216ENST00000638163 PTCH2Q9Y6C5 1203 aa11.24□□□□□ -0.61
LINC00598-216ENST00000638163 SCN10AQ9Y5Y9 1956 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 PROZP22891 400 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 EIF4BP23588 611 aaKnown RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 MATR3P43243 847 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 SOX10P56693 466 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 NLRP11P59045 1033 aaKnown RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 CLDN10P78369 228 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 ZBED6P86452 979 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 TBX2Q13207 712 aaPredicted RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 PSMD6Q15008 389 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 NBPF20Q3BBV1 942 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 DCAF17Q5H9S7 520 aaPredicted RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 NOTUMQ6P988 496 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 FBXO46Q6PJ61 603 aaPredicted RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 CXCL17Q6UXB2 119 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 CCDC186Q7Z3E2 898 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 HACE1Q8IYU2 909 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 SYN2Q92777 582 aaPredicted RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 LENG1Q96BZ8 264 aaPredicted RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 PCMTD1Q96MG8 357 aaPredicted RBP11.23□□□□□ -0.61
LINC00598-216ENST00000638163 CBWD1Q9BRT8 395 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 TCHPQ9BT92 498 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 POLD4Q9HCU8 107 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 INTS13Q9NVM9 706 aa11.23□□□□□ -0.61
LINC00598-216ENST00000638163 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms