RNA–Protein interactions for RNA: ENST00000637788.1

ARID1A-217, Transcript of AT-rich interaction domain 1A, human

Gene ARID1A, Length 3,046 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-217	ENST00000637788	CARD9	Q9H257	536 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	WDR37	Q9Y2I8	494 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	PLIN4	Q96Q06	1357 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	ABCB11	O95342	1321 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	CCDC188	H7C350	402 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	DAPK3	O43293	454 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	TLR2	O60603	784 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	NOL4	O94818	638 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	STAT3	P40763	770 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	BPIFB4	P59827	614 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	RNASE9	P60153	205 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	OCRL	Q01968	901 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	COL23A1	Q86Y22	540 aa	Predicted RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	RNF168	Q8IYW5	571 aa	Predicted RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	STKLD1	Q8NE28	680 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	TSPAN18	Q96SJ8	248 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	LSM14B	Q9BX40	385 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SPATA16	Q9BXB7	569 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	NMRK1	Q9NWW6	199 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	FAM196B	A6NMK8	535 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SHMT1	P34896	483 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	VHL	P40337	213 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	ZRSR2	Q15696	482 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	CNGA2	Q16280	664 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	FAM83B	Q5T0W9	1011 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	RNF43	Q68DV7	783 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	TSHZ1	Q6ZSZ6	1077 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SMC1B	Q8NDV3	1235 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	FAM13C	Q8NE31	585 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	TAF4B	Q92750	862 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	RANBP17	Q9H2T7	1088 aa	Known RBP	11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	SLITRK6	Q9H5Y7	841 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	USP40	Q9NVE5	1235 aa		11.14	□□□□□ -0.63
ARID1A-217	ENST00000637788	ZBTB5	O15062	677 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	RGS16	O15492	202 aa	Predicted RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	PFDN1	O60925	122 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	BBOX1	O75936	387 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	AFP	P02771	609 aa	Known RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	RCN2	Q14257	317 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	GPBP1	Q86WP2	473 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	CCNJL	Q8IV13	435 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	PROM2	Q8N271	834 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	DDX23	Q9BUQ8	820 aa	Known RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	LRRC27	Q9C0I9	530 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	STMN4	Q9H169	189 aa	Predicted RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	DPH5	Q9H2P9	285 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	DCLRE1B	Q9H816	532 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	LUC7L	Q9NQ29	371 aa	Known RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	FGFR1OP2	Q9NVK5	253 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	STOML1	Q9UBI4	398 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	CETN3	O15182	167 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	ECE2	O60344	883 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	PLA2G4B	P0C869	781 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	ZNF24	P17028	368 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	IFNAR2	P48551	515 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	USP46	P62068	366 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	NFIA	Q12857	509 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	TMED1	Q13445	227 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	DOK7	Q18PE1	504 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	SLC9C1	Q4G0N8	1177 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	C6orf118	Q5T5N4	469 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	SFMBT2	Q5VUG0	894 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	CEP128	Q6ZU80	1094 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	SMYD1	Q8NB12	490 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	INPP5D	Q92835	1189 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	SLC35B4	Q969S0	331 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	GJD4	Q96KN9	370 aa	Predicted RBP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	PPP1R12C	Q9BZL4	782 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	EPB41L4B	Q9H329	900 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	USP20	Q9Y2K6	914 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	ATP8A1	Q9Y2Q0	1164 aa		11.13	□□□□□ -0.63
ARID1A-217	ENST00000637788	NHS	Q6T4R5	1651 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	LGR5	O75473	907 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	RAPGEF1	Q13905	1077 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	KPNB1	Q14974	876 aa	Known RBP	11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	RASIP1	Q5U651	963 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	FBXO41	Q8TF61	875 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	SCFD1	Q8WVM8	642 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	MIS12	Q9H081	205 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	PABPC3	Q9H361	631 aa	Known RBP	11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	CEP72	Q9P209	647 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	TAF1L	Q8IZX4	1826 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEF	A5A3E0	1075 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	ATP9A	O75110	1047 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	ZNF189	O75820	626 aa	Predicted RBP	11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	KRT18	P05783	430 aa	Known RBP	11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEI	P0CG38	1075 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	CACNB3	P54284	484 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	IFI35	P80217	286 aa	Predicted RBP	11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	ACVR2B	Q13705	512 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	GSTA3	Q16772	222 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	TNFAIP8L3	Q5GJ75	292 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	PPP1R18	Q6NYC8	613 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEG	Q6S5H5	508 aa		11.12	□□□□□ -0.63
ARID1A-217	ENST00000637788	POTEE	Q6S8J3	1075 aa		11.12	□□□□□ -0.63

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