RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 TRIML1Q8N9V2 468 aa24.55■■□□□ 1.52
CHRNA7-231ENST00000637786 GLIS3Q8NEA6 775 aa24.55■■□□□ 1.52
CHRNA7-231ENST00000637786 SCFD1Q8WVM8 642 aa24.55■■□□□ 1.52
CHRNA7-231ENST00000637786 CPB2Q96IY4 423 aa24.55■■□□□ 1.52
CHRNA7-231ENST00000637786 TARS2Q9BW92 718 aaKnown RBP24.55■■□□□ 1.52
CHRNA7-231ENST00000637786 PDZD7Q9H5P4 517 aa24.55■■□□□ 1.52
CHRNA7-231ENST00000637786 A0A0U1RQF3 1178 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 C9IYK1 514 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 HNRNPDLO14979 420 aaKnown RBP24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 TOM1L1O75674 476 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 PRPF6O94906 941 aaKnown RBP24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 KIF20AO95235 890 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 PROZP22891 400 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 WDR5P61964 334 aaKnown RBP24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 FAM189BP81408 668 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 SKOR2Q2VWA4 1001 aaPredicted RBP24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 COBLL1Q53SF7 1204 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 CCDC183Q5T5S1 534 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 RBM43Q6ZSC3 357 aaKnown RBP24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 BICD1Q96G01 975 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 ADPGKQ9BRR6 497 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 PTPRHQ9HD43 1115 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 MAN1B1Q9UKM7 699 aa24.54■■□□□ 1.52
CHRNA7-231ENST00000637786 ZNF623O75123 536 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 AMHP03971 560 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 KCNJ6P48051 423 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 LIG4P49917 911 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 KCNA1Q09470 495 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 DCAF4L1Q3SXM0 396 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 UBXN11Q5T124 520 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 SYAP1Q96A49 352 aaPredicted RBP24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 PRO3102Q9H379 93 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 ELAC1Q9H777 363 aaKnown RBP24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 FAM105AQ9NUU6 356 aa24.53■■□□□ 1.52
CHRNA7-231ENST00000637786 RBAK-RBAKDNI3L0D1 243 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 HOXD13P35453 343 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 MORC3Q14149 939 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 SHHQ15465 462 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 NFKBIBQ15653 356 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 C9orf50Q5SZB4 431 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 MPZL3Q6UWV2 235 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 MYOCDQ8IZQ8 938 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 SYCP3Q8IZU3 236 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 GUF1Q8N442 669 aaKnown RBP24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 USP20Q9Y2K6 914 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 GDAQ9Y2T3 454 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 STYXL1Q9Y6J8 313 aa24.52■■□□□ 1.52
CHRNA7-231ENST00000637786 ZBBXA8MT70 800 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 ABLIM1O14639 778 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 SNRPFP62306 86 aaKnown RBP24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 KNOP1Q1ED39 458 aaKnown RBP24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 EEF1DP3Q658K8 133 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 SLFN12LQ6IEE8 588 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 ECHDC2Q86YB7 292 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 CRIPAKQ8N1N5 446 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 PHOSPHO2Q8TCD6 241 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 RNPC3Q96LT9 517 aaKnown RBP24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 SLC9A7Q96T83 725 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 GBP3Q9H0R5 595 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 CXXC1Q9P0U4 656 aaPredicted RBP24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 CGNQ9P2M7 1197 aaKnown RBP24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 SLC4A7Q9Y6M7 1214 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 PTPRSQ13332 1948 aa24.51■■□□□ 1.51
CHRNA7-231ENST00000637786 CLDN3O15551 220 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 EOMESO95936 686 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 MCF2P10911 925 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 PPP1R2P41236 205 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 MCL1Q07820 350 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 ZNF568Q3ZCX4 644 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 PRPF38BQ5VTL8 546 aaKnown RBP24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 SLC39A4Q6P5W5 647 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 MRPL10Q7Z7H8 261 aaKnown RBP24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 NPAS4Q8IUM7 802 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 EIF2AQ9BY44 585 aaKnown RBP24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 TRIM6Q9C030 488 aaPredicted RBP24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 TMEM161AQ9NX61 479 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 TMEM63CQ9P1W3 806 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 PCDHB2Q9Y5E7 798 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 ZMYM2Q9UBW7 1377 aa24.5■■□□□ 1.51
CHRNA7-231ENST00000637786 NPTXRO95502 500 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 STAG3L1P0CL83 205 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 DEFB103AP81534 67 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 NOLC1Q14978 699 aaKnown RBP eCLIP24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 CHRDL2Q6WN34 429 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 ZNF598Q86UK7 904 aaKnown RBP24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 CDR2LQ86X02 465 aaPredicted RBP24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 HACE1Q8IYU2 909 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 TDHQ8IZJ6 230 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 GOLGA5Q8TBA6 731 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 TOP1MTQ969P6 601 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 TCHPQ9BT92 498 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 CDT1Q9H211 546 aa24.49■■□□□ 1.51
CHRNA7-231ENST00000637786 A0A0B4J269 797 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 A0A1W2PPC1 479 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 ANKRD63C9JTQ0 380 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 BMP6P22004 513 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 CAVIN1Q6NZI2 390 aaKnown RBP24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 HS2ST1Q7LGA3 356 aa24.48■■□□□ 1.51
CHRNA7-231ENST00000637786 NELFCDQ8IXH7 590 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms