RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 PIK3AP1Q6ZUJ8 805 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 CMASQ8NFW8 434 aaPredicted RBP19.92■□□□□ 0.78
CIITA-215ENST00000637439 HERC2P3Q9BVR0 1158 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 RGL1Q9NZL6 768 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 INPPL1O15357 1258 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 AK2P54819 239 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 POU5F1BQ06416 359 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 SCRN1Q12765 414 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 COLGALT2Q8IYK4 626 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 HACE1Q8IYU2 909 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 SMG8Q8ND04 991 aaKnown RBP19.91■□□□□ 0.78
CIITA-215ENST00000637439 WASF1Q92558 559 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 DYDC2Q96IM9 177 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 RPS6KC1Q96S38 1066 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 RHOBTB2Q9BYZ6 727 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 BMP2KQ9NSY1 1161 aaPredicted RBP19.91■□□□□ 0.78
CIITA-215ENST00000637439 IPPQ9Y573 584 aa19.91■□□□□ 0.78
CIITA-215ENST00000637439 ARID2Q68CP9 1835 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 ARL5CA6NH57 179 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 C2CD2LO14523 706 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 NBL1P41271 181 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 OR1G1P47890 313 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 PTENP60484 403 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 CTTNQ14247 550 aaKnown RBP19.9■□□□□ 0.78
CIITA-215ENST00000637439 POTEDQ86YR6 584 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 IFNLR1Q8IU57 520 aaPredicted RBP19.9■□□□□ 0.78
CIITA-215ENST00000637439 STAMQ92783 540 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 MAN1C1Q9NR34 630 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 IGSF9Q9P2J2 1179 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 PRG3Q9Y2Y8 225 aaPredicted RBP19.9■□□□□ 0.78
CIITA-215ENST00000637439 PLXNA3P51805 1871 aa19.9■□□□□ 0.78
CIITA-215ENST00000637439 TSPAN1O60635 241 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 GLUD1P00367 558 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 C1RP00736 705 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 GLUD2P49448 558 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 CYP4A11Q02928 519 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 SPIRE1Q08AE8 756 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 C2orf16Q68DN1 1984 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 TPH2Q8IWU9 490 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 FLCNQ8NFG4 579 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 OXER1Q8TDS5 423 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 HDAC7Q8WUI4 952 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 GAD1Q99259 594 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 COLEC11Q9BWP8 271 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 CSRNP2Q9H175 543 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 KCNK12Q9HB15 430 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 BRMS1Q9HCU9 246 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 MARCH5Q9NX47 278 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 DUSP12Q9UNI6 340 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 GIT1Q9Y2X7 761 aa19.89■□□□□ 0.77
CIITA-215ENST00000637439 CFAP54Q96N23 3096 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 CCDC195A0A1B0GUA6 201 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 INO80B-WBP1J3KQ70 363 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 TEX28O15482 410 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 PFKFB2O60825 505 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 DGAT1O75907 488 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 SLITRK3O94933 977 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 LYPLA2O95372 231 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 MLH1P40692 756 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 DSC1Q08554 894 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 KIAA0319Q5VV43 1072 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 RNF168Q8IYW5 571 aaPredicted RBP19.88■□□□□ 0.77
CIITA-215ENST00000637439 EIF2AQ9BY44 585 aaKnown RBP19.88■□□□□ 0.77
CIITA-215ENST00000637439 TRIM6Q9C030 488 aaPredicted RBP19.88■□□□□ 0.77
CIITA-215ENST00000637439 RXFP1Q9HBX9 757 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 ANKEF1Q9NU02 776 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 FBXL21Q9UKT6 434 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 PCDHA12Q9UN75 941 aa19.88■□□□□ 0.77
CIITA-215ENST00000637439 MYO15AQ9UKN7 3530 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 ZBTB39O15060 712 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 EFEMP2O95967 443 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 AOC1P19801 751 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 KRT2P35908 639 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 DSG1Q02413 1049 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 TAS1R1Q7RTX1 841 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 GPR65Q8IYL9 337 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 FEZF2Q8TBJ5 459 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 CPB2Q96IY4 423 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 CCDC43Q96MW1 224 aaKnown RBP19.87■□□□□ 0.77
CIITA-215ENST00000637439 EIF2AK1Q9BQI3 630 aaKnown RBP19.87■□□□□ 0.77
CIITA-215ENST00000637439 RTP3Q9BQQ7 232 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 NFKBIZQ9BYH8 718 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 PLEKHA4Q9H4M7 779 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 WDR6Q9NNW5 1121 aaKnown RBP19.87■□□□□ 0.77
CIITA-215ENST00000637439 XPNPEP1Q9NQW7 623 aa19.87■□□□□ 0.77
CIITA-215ENST00000637439 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.87■□□□□ 0.77
CIITA-215ENST00000637439 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
CIITA-215ENST00000637439 TDRD15B5MCY1 1934 aaKnown RBP19.86■□□□□ 0.77
CIITA-215ENST00000637439 ZMYM2Q9UBW7 1377 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 SCNN1GP51170 649 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 MBTD1Q05BQ5 628 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 ANKRD1Q15327 319 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 CWF19L1Q69YN2 538 aaKnown RBP19.86■□□□□ 0.77
CIITA-215ENST00000637439 NXPE3Q969Y0 559 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 HSD17B14Q9BPX1 270 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 CHST7Q9NS84 486 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 GJB4Q9NTQ9 266 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 HES2Q9Y543 173 aa19.86■□□□□ 0.77
CIITA-215ENST00000637439 CLUHO75153 1309 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms