RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MGAT3Q09327 533 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 KCNJ12Q14500 433 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 SNX17Q15036 470 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 ARMCX5Q6P1M9 558 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 FAM126BQ8IXS8 530 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 CCDC155Q8N6L0 562 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 XXYLT1Q8NBI6 393 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 CAGE1Q8TC20 777 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 DHX38Q92620 1227 aaKnown RBP14.64□□□□□ -0.07
LINC00643-207ENST00000637212 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
LINC00643-207ENST00000637212 PTPRHQ9HD43 1115 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 CDY2AQ9Y6F7 541 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 SCN10AQ9Y5Y9 1956 aa14.64□□□□□ -0.07
LINC00643-207ENST00000637212 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 CLDN3O15551 220 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 EXOC3O60645 756 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 ERLIN2O94905 339 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 CHRNA1P02708 482 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 PROZP22891 400 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 FANCCQ00597 558 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 POU5F1Q01860 360 aaKnown RBP14.63□□□□□ -0.07
LINC00643-207ENST00000637212 ENPEPQ07075 957 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 MCL1Q07820 350 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 TMEM62Q0P6H9 643 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 BFSP2Q13515 415 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 KYAT1Q16773 422 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 ATF7IP2Q5U623 682 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 SLC39A4Q6P5W5 647 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 APBB1IPQ7Z5R6 666 aaPredicted RBP14.63□□□□□ -0.07
LINC00643-207ENST00000637212 POMGNT1Q8WZA1 660 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 WNT8BQ93098 351 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 FBXL18Q96ME1 805 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 OSMRQ99650 979 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 CBWD1Q9BRT8 395 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 IKZF4Q9H2S9 585 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 C11orf49Q9H6J7 331 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 HSPBP1Q9NZL4 362 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 CNTNAP2Q9UHC6 1331 aa14.63□□□□□ -0.07
LINC00643-207ENST00000637212 DCDC2CA8MYV0 355 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 GPR182O15218 404 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 CBFA2T2O43439 604 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 EXTL3O43909 919 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 TSPAN1O60635 241 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 AKAP3O75969 853 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 SERPINC1P01008 464 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 TPM2P07951 284 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 EPB41P11171 864 aaKnown RBP14.62□□□□□ -0.07
LINC00643-207ENST00000637212 ATP1A3P13637 1013 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 PPP2R3AQ06190 1150 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 FILIP1LQ4L180 1135 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 CEP135Q66GS9 1140 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 MPZL3Q6UWV2 235 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 CATSPER4Q7RTX7 472 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 NECAB2Q7Z6G3 386 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 ANP32BQ92688 251 aaKnown RBP14.62□□□□□ -0.07
LINC00643-207ENST00000637212 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 BORCS6Q96GS4 357 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 CNOT6LQ96LI5 555 aaKnown RBP14.62□□□□□ -0.07
LINC00643-207ENST00000637212 PPP1R16BQ96T49 567 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 CHST12Q9NRB3 414 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 ARMCX3Q9UH62 379 aaPredicted RBP14.62□□□□□ -0.07
LINC00643-207ENST00000637212 AGO2Q9UKV8 859 aaKnown RBP14.62□□□□□ -0.07
LINC00643-207ENST00000637212 GINS2Q9Y248 185 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
LINC00643-207ENST00000637212 TISP43B9A030 160 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 ABLIM1O14639 778 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 N4BP3O15049 544 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 TNRC18O15417 2968 aaPredicted RBP14.61□□□□□ -0.07
LINC00643-207ENST00000637212 MCF2P10911 925 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 CKBP12277 381 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 ARF4P18085 180 aaPredicted RBP14.61□□□□□ -0.07
LINC00643-207ENST00000637212 HOXA11P31270 313 aaPredicted RBP14.61□□□□□ -0.07
LINC00643-207ENST00000637212 CYP2J2P51589 502 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 UBASH3AP57075 661 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 KRT31Q15323 416 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 TMEM132AQ24JP5 1023 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 CCDC40Q4G0X9 1142 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 FAM186BQ8IYM0 893 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 GPD1LQ8N335 351 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 EEF2KMTQ96G04 330 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 PAWRQ96IZ0 340 aaKnown RBP14.61□□□□□ -0.07
LINC00643-207ENST00000637212 TUBGCP2Q9BSJ2 902 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 PCIF1Q9H4Z3 704 aa14.61□□□□□ -0.07
LINC00643-207ENST00000637212 ZNF233A6NK53 670 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 PITPNM1O00562 1244 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 OGTO15294 1046 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 B4GALT5O43286 388 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 CSDE1O75534 798 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 RPS6KA5O75582 802 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 PARNO95453 639 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 EDN1P05305 212 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 TPM3P06753 285 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 SELPP16109 830 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 MATR3P43243 847 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 MTIF2P46199 727 aaKnown RBP14.6□□□□□ -0.07
LINC00643-207ENST00000637212 CASP4P49662 377 aa14.6□□□□□ -0.07
LINC00643-207ENST00000637212 ATN1P54259 1190 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms