RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KCNA1Q09470 495 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 ATF7IP2Q5U623 682 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 EEF1DP3Q658K8 133 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 TWF2Q6IBS0 349 aaKnown RBP17.55■□□□□ 0.4
CLN6-216ENST00000636876 ZPBP2Q6X784 338 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 SCFD1Q8WVM8 642 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 BICD1Q96G01 975 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 TRAIPQ9BWF2 469 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 GTPBP4Q9BZE4 634 aaKnown RBP17.55■□□□□ 0.4
CLN6-216ENST00000636876 MTIF3Q9H2K0 278 aaKnown RBP17.55■□□□□ 0.4
CLN6-216ENST00000636876 C1orf112Q9NSG2 853 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 EXOC7Q9UPT5 735 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 GDAQ9Y2T3 454 aa17.55■□□□□ 0.4
CLN6-216ENST00000636876 C9IYK1 514 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 HNRNPDLO14979 420 aaKnown RBP17.54■□□□□ 0.4
CLN6-216ENST00000636876 HOXD13P35453 343 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 KCNJ6P48051 423 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 LIG4P49917 911 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 SHHQ15465 462 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 NFKBIBQ15653 356 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 BMT2Q1RMZ1 405 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 KLHL40Q2TBA0 621 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 CCDC183Q5T5S1 534 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 ZNF658Q5TYW1 1059 aaPredicted RBP17.54■□□□□ 0.4
CLN6-216ENST00000636876 RASIP1Q5U651 963 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 SLC27A1Q6PCB7 646 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLN6-216ENST00000636876 SLC24A5Q71RS6 500 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 CDR2LQ86X02 465 aaPredicted RBP17.54■□□□□ 0.4
CLN6-216ENST00000636876 TMEM206Q9H813 350 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 CXXC1Q9P0U4 656 aaPredicted RBP17.54■□□□□ 0.4
CLN6-216ENST00000636876 TTC3P53804 2025 aa17.54■□□□□ 0.4
CLN6-216ENST00000636876 A0A0U1RQF3 1178 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 BIN1O00499 593 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 ABLIM1O14639 778 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 TOM1L1O75674 476 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 PROZP22891 400 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 FAM189BP81408 668 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 MORC3Q14149 939 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 SLC39A4Q6P5W5 647 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 NELFCDQ8IXH7 590 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 MYOCDQ8IZQ8 938 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 SYCP3Q8IZU3 236 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 RNPC3Q96LT9 517 aaKnown RBP17.53■□□□□ 0.4
CLN6-216ENST00000636876 ADPGKQ9BRR6 497 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 EIF2AQ9BY44 585 aaKnown RBP17.53■□□□□ 0.4
CLN6-216ENST00000636876 IKZF4Q9H2S9 585 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 PTPRHQ9HD43 1115 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 FAM105AQ9NUU6 356 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 TMEM63CQ9P1W3 806 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 ZMYM2Q9UBW7 1377 aa17.53■□□□□ 0.4
CLN6-216ENST00000636876 ANKRD63C9JTQ0 380 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 SOX1O00570 391 aaPredicted RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 NPTXRO95502 500 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 AMHP03971 560 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 SKIP12755 728 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 RAB27AP51159 221 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 DEFB103AP81534 67 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 ZNF568Q3ZCX4 644 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 ISM2Q6H9L7 571 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 CAVIN1Q6NZI2 390 aaKnown RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 MPZL3Q6UWV2 235 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 RBM43Q6ZSC3 357 aaKnown RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 ECHDC2Q86YB7 292 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 SMYD4Q8IYR2 804 aaPredicted RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 GUF1Q8N442 669 aaKnown RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 TRIML1Q8N9V2 468 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 ZBTB45Q96K62 511 aaPredicted RBP17.52■□□□□ 0.4
CLN6-216ENST00000636876 CDT1Q9H211 546 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 PCDHB2Q9Y5E7 798 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 SLC4A7Q9Y6M7 1214 aa17.52■□□□□ 0.4
CLN6-216ENST00000636876 TISP43B9A030 160 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 ZNF623O75123 536 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 KIF20AO95235 890 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 MCF2P10911 925 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 BMP6P22004 513 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 MCL1Q07820 350 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN6-216ENST00000636876 KNOP1Q1ED39 458 aaKnown RBP17.51■□□□□ 0.39
CLN6-216ENST00000636876 COBLL1Q53SF7 1204 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 ZNF598Q86UK7 904 aaKnown RBP17.51■□□□□ 0.39
CLN6-216ENST00000636876 NPAS4Q8IUM7 802 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
CLN6-216ENST00000636876 TCHPQ9BT92 498 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 TRIM6Q9C030 488 aaPredicted RBP17.51■□□□□ 0.39
CLN6-216ENST00000636876 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 ELAC1Q9H777 363 aaKnown RBP17.51■□□□□ 0.39
CLN6-216ENST00000636876 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
CLN6-216ENST00000636876 ANKFY1Q9P2R3 1169 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 STYXL1Q9Y6J8 313 aa17.51■□□□□ 0.39
CLN6-216ENST00000636876 A0A0B4J269 797 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 CLDN3O15551 220 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 ATF7P17544 494 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms