RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 INPP5FQ9Y2H2 1132 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 MEIS3P2A8K0S8 358 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 HOXA11P31270 313 aaPredicted RBP20.36■□□□□ 0.85
CLN6-214ENST00000636314 PLCB3Q01970 1234 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 NOTUMQ6P988 496 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 PADI6Q6TGC4 694 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 DTHD1Q6ZMT9 781 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 CCDC51Q96ER9 411 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 ASIC4Q96FT7 647 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 MYO10Q9HD67 2058 aa20.36■□□□□ 0.85
CLN6-214ENST00000636314 CNTNAP2Q9UHC6 1331 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 ECM1Q16610 540 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 NOMO2Q5JPE7 1267 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 UBXN11Q5T124 520 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 KRT79Q5XKE5 535 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 SYCE2Q6PIF2 218 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 TMEM184AQ6ZMB5 413 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 ZBTB8OSQ8IWT0 167 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 URGCPQ8TCY9 931 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 CPB2Q96IY4 423 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 S1PR5Q9H228 398 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 BHMT2Q9H2M3 363 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 RSAD1Q9HA92 442 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 TSHZ2Q9NRE2 1034 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 DDX19AQ9NUU7 478 aaKnown RBP20.35■□□□□ 0.85
CLN6-214ENST00000636314 SPG21Q9NZD8 308 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 KIAA1024Q9UPX6 916 aa20.35■□□□□ 0.85
CLN6-214ENST00000636314 PP2D1A8MPX8 630 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 HIDE1A8MVS5 230 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 ZC3H11AO75152 810 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLN6-214ENST00000636314 CYP11B2P19099 503 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 AVPR2P30518 371 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 ALDH7A1P49419 539 aaKnown RBP20.34■□□□□ 0.85
CLN6-214ENST00000636314 ATP2C1P98194 919 aaPredicted RBP20.34■□□□□ 0.85
CLN6-214ENST00000636314 KRT17Q04695 432 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 RNASELQ05823 741 aaKnown RBP20.34■□□□□ 0.85
CLN6-214ENST00000636314 CUL4AQ13619 759 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 KCNC3Q14003 757 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 AGMOQ6ZNB7 445 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 TMC7Q7Z402 723 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 MRPL10Q7Z7H8 261 aaKnown RBP20.34■□□□□ 0.85
CLN6-214ENST00000636314 SLC39A11Q8N1S5 342 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 CNNM3Q8NE01 707 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 NGRNQ9NPE2 291 aaKnown RBP20.34■□□□□ 0.85
CLN6-214ENST00000636314 TBC1D13Q9NVG8 400 aa20.34■□□□□ 0.85
CLN6-214ENST00000636314 CARNS1A5YM72 827 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 OFD1O75665 1012 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 ARF4P18085 180 aaPredicted RBP20.33■□□□□ 0.85
CLN6-214ENST00000636314 NCLP19338 710 aaKnown RBP20.33■□□□□ 0.85
CLN6-214ENST00000636314 BCAR1P56945 870 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 IL17AQ16552 155 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 AMHR2Q16671 573 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 ATOH1Q92858 354 aaPredicted RBP20.33■□□□□ 0.85
CLN6-214ENST00000636314 EIF2AQ9BY44 585 aaKnown RBP20.33■□□□□ 0.85
CLN6-214ENST00000636314 TRIM6Q9C030 488 aaPredicted RBP20.33■□□□□ 0.85
CLN6-214ENST00000636314 CSRNP2Q9H175 543 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 NR2E1Q9Y466 385 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 IPPQ9Y573 584 aa20.33■□□□□ 0.85
CLN6-214ENST00000636314 VPS37CA5D8V6 355 aaPredicted RBP20.32■□□□□ 0.84
CLN6-214ENST00000636314 B4GALT5O43286 388 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 GFRA3O60609 400 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 ITGA4P13612 1032 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 HOXB8P17481 243 aaPredicted RBP20.32■□□□□ 0.84
CLN6-214ENST00000636314 CA8P35219 290 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 PPP2R5AQ15172 486 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 CDCA2Q69YH5 1023 aaPredicted RBP20.32■□□□□ 0.84
CLN6-214ENST00000636314 CASP10Q92851 521 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 TMEM169Q96HH4 297 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 GBP3Q9H0R5 595 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 C2orf40Q9H1Z8 148 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 PRMT7Q9NVM4 692 aaPredicted RBP20.32■□□□□ 0.84
CLN6-214ENST00000636314 CDH22Q9UJ99 828 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 PLXNA3P51805 1871 aa20.32■□□□□ 0.84
CLN6-214ENST00000636314 NT5C1B-RDH14C9J2C7 533 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 PDGFBP01127 241 aaPredicted RBP20.31■□□□□ 0.84
CLN6-214ENST00000636314 PDCP20941 246 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 CDC25AP30304 524 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 NAMPTP43490 491 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 SMC1AQ14683 1233 aaKnown RBP20.31■□□□□ 0.84
CLN6-214ENST00000636314 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 PPP4R3CPQ6ZMV5 832 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 BRAPQ7Z569 592 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 HACE1Q8IYU2 909 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 SMG8Q8ND04 991 aaKnown RBP20.31■□□□□ 0.84
CLN6-214ENST00000636314 DEPTORQ8TB45 409 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 BSNDQ8WZ55 320 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 PRIMPOLQ96LW4 560 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 RIPOR3Q96MK2 946 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 IRF2BPLQ9H1B7 796 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 NRDE2Q9H7Z3 1164 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 UBN1Q9NPG3 1134 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 DNM3Q9UQ16 869 aa20.31■□□□□ 0.84
CLN6-214ENST00000636314 TDRD15B5MCY1 1934 aaKnown RBP20.3■□□□□ 0.84
CLN6-214ENST00000636314 CFAP54Q96N23 3096 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 E9PMD0 336 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
CLN6-214ENST00000636314 TMEM132AQ24JP5 1023 aa20.3■□□□□ 0.84
CLN6-214ENST00000636314 ARL6IP4Q66PJ3 421 aaKnown RBP20.3■□□□□ 0.84
CLN6-214ENST00000636314 CES5AQ6NT32 575 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms