RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	PANX2	Q96RD6	677 aa		15.34	■□□□□ 0.05
NEDD4L-238	ENST00000635997	MXRA8	Q9BRK3	442 aa		15.34	■□□□□ 0.05
NEDD4L-238	ENST00000635997	MRPL47	Q9HD33	250 aa	Known RBP	15.34	■□□□□ 0.05
NEDD4L-238	ENST00000635997	AR	P10275	920 aa		15.33	■□□□□ 0.05
NEDD4L-238	ENST00000635997	COL9A3	Q14050	684 aa	Predicted RBP	15.33	■□□□□ 0.05
NEDD4L-238	ENST00000635997	RAB3IL1	Q8TBN0	382 aa		15.33	■□□□□ 0.05
NEDD4L-238	ENST00000635997	TMEM169	Q96HH4	297 aa		15.33	■□□□□ 0.05
NEDD4L-238	ENST00000635997	CEP63	Q96MT8	703 aa		15.33	■□□□□ 0.05
NEDD4L-238	ENST00000635997	MRPL4	Q9BYD3	311 aa	Known RBP	15.33	■□□□□ 0.05
NEDD4L-238	ENST00000635997	PGRMC1	O00264	195 aa	Known RBP	15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	CATSPER3	Q86XQ3	398 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	KCTD6	Q8NC69	237 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	APBA2	Q99767	749 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	MRI	Q9BWK5	157 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ODF2L	Q9ULJ1	636 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SHMT1	P34896	483 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SLCO1A2	P46721	670 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	GJC2	Q5T442	439 aa	Predicted RBP	15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	KRT39	Q6A163	491 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	VGLL2	Q8N8G2	317 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	KIF12	Q96FN5	646 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	KCNF1	Q9H3M0	494 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SLC15A5	A6NIM6	579 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	MSH4	O15457	936 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	HUS1	O60921	280 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	CRCP	O75575	148 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PALM	O75781	387 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	CIITA	P33076	1130 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	RYBP	Q8N488	228 aa	Predicted RBP	15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	HSPH1	Q92598	858 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	MOV10L1	Q9BXT6	1211 aa	Known RBP	15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	EHD4	Q9H223	541 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SEL1L	Q9UBV2	794 aa		15.33	■□□□□ 0.04
NEDD4L-238	ENST00000635997	C17orf102	A2RUQ5	167 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	RSPH10B2	B2RC85	870 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PRPSAP2	O60256	369 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	DGAT1	O75907	488 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	RSPH10B	P0C881	870 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	IFNAR2	P48551	515 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	GLB1L	Q6UWU2	654 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	IFNL1	Q8IU54	200 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	DCLK2	Q8N568	766 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	RNF139	Q8WU17	664 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	TARS2	Q9BW92	718 aa	Known RBP	15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	NCK2	O43639	380 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	FGG	P02679	453 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	GPC3	P51654	580 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SETDB1	Q15047	1291 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SURF1	Q15526	300 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	FAM110C	Q1W6H9	321 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	SARM1	Q6SZW1	724 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ARMCX2	Q7L311	632 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ANKRD23	Q86SG2	305 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	DNAAF3	Q8N9W5	541 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	RNF25	Q96BH1	459 aa	Predicted RBP	15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	AFG3L2	Q9Y4W6	797 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	MED7	O43513	233 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	KPNA6	O60684	536 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	CSDE1	O75534	798 aa	Known RBP	15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	USP2	O75604	605 aa	Predicted RBP	15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ATP5D	P30049	168 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	TOB1	P50616	345 aa	Predicted RBP	15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	EARS2	Q5JPH6	523 aa	Known RBP	15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ADSSL1	Q8N142	457 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	TMEM35B	Q8NCS4	154 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	EPC1	Q9H2F5	836 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	AGPAT5	Q9NUQ2	364 aa		15.32	■□□□□ 0.04
NEDD4L-238	ENST00000635997	FTL	P02792	175 aa	Predicted RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PRKCB	P05771	671 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PSMA2	P25787	234 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	NTRK3	Q16288	839 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	YAF2	Q8IY57	180 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ABCC6	O95255	1503 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	GIPC1	O14908	333 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ARL4A	P40617	200 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	LIG3	P49916	1009 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	DPYD	Q12882	1025 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	LGSN	Q5TDP6	509 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	GPR142	Q7Z601	462 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ERAP1	Q9NZ08	941 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	HDAC6	Q9UBN7	1215 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PDS5A	Q29RF7	1337 aa	Known RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PASK	Q96RG2	1323 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	IQCB1	Q15051	598 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	BRD3	Q15059	726 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PRAMEF19	Q5SWL8	479 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PDZD4	Q76G19	769 aa	Predicted RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	INTS2	Q9H0H0	1204 aa	Known RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	PDE11A	Q9HCR9	933 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	CEP72	Q9P209	647 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	CYP26A1	O43174	497 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ADORA2B	P29275	332 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ADCYAP1R1	P41586	468 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	ORC2	Q13416	577 aa	Predicted RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	C15orf52	Q6ZUT6	534 aa	Known RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	TEX2	Q8IWB9	1127 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	FBXL13	Q8NEE6	735 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	MTG1	Q9BT17	334 aa	Predicted RBP	15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	FAM198A	Q9UFP1	575 aa		15.31	■□□□□ 0.04
NEDD4L-238	ENST00000635997	TBK1	Q9UHD2	729 aa		15.31	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms