RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 BCAMP50895 628 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 GUCY1A3Q02108 690 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 BSDC1Q9NW68 430 aaPredicted RBP13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 LAMC2Q13753 1193 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 PDCD6IPQ8WUM4 868 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 RPRD1BQ9NQG5 326 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 ZNF197O14709 1029 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 NDUFA10O95299 355 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 HIF1AQ16665 826 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 THEMIS2Q5TEJ8 643 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 PAIP2BQ9ULR5 123 aaKnown RBP13.96□□□□□ -0.17
SYNGAP1-208ENST00000629380 EIF2S1P05198 315 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 CDO1Q16878 200 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 EFHC2Q5JST6 749 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 HEATR6Q6AI08 1181 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 OSBPL10Q9BXB5 764 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 HUS1O60921 280 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 BRAFP15056 766 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 PDCLQ13371 301 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 CDKL3Q8IVW4 592 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 ST13P5Q8NFI4 369 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 SMARCAL1Q9NZC9 954 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 ZBTB1Q9Y2K1 713 aa13.96□□□□□ -0.18
SYNGAP1-208ENST00000629380 ST13P50502 369 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 ZNF827Q17R98 1081 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 PPCSQ9HAB8 311 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 UNC13BO14795 1591 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 E4F1Q66K89 784 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 CCNYL1Q8N7R7 359 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 A0A0D9SFI3 127 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 CXCR5P32302 372 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 NCALDP61601 193 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 VSTM4Q8IW00 320 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 PPP2R3CQ969Q6 453 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 MAD2L2Q9UI95 211 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 GSPT1P15170 499 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 PLCG1P19174 1290 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 NUP62P37198 522 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 CSTF3Q12996 717 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 SYTL3Q4VX76 610 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 HORMAD1Q86X24 394 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 TERB1Q8NA31 727 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 SMARCAD1Q9H4L7 1026 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 CEP72Q9P209 647 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 HIBCHQ6NVY1 386 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 PKN3Q6P5Z2 889 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 BEST2Q8NFU1 509 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 OTUD7AQ8TE49 926 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 TK2O00142 265 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 SDR42E1Q8WUS8 393 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 SH3GL3Q99963 347 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 KCNA2P16389 499 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 TRIP4Q15650 581 aaPredicted RBP13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 P3H1Q32P28 736 aa13.95□□□□□ -0.18
SYNGAP1-208ENST00000629380 BNIP3LO60238 219 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 PRAMEP78395 509 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 MRPL48Q96GC5 212 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 ANAPC7Q9UJX3 599 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 PRDM15P57071 1507 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 HAUS5O94927 633 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 FASTKD1Q53R41 847 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 FAM180AQ6UWF9 173 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 USP28Q96RU2 1077 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 AIPL1Q9NZN9 384 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 CTIFO43310 598 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 CDC27P30260 824 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 SH3GL2Q99962 352 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 SERPINB13Q9UIV8 391 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 K7ERI5 159 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 FTCDO95954 541 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 VCAM1P19320 739 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 HIPK4Q8NE63 616 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 GRAMD1AQ96CP6 724 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 VPS50Q96JG6 964 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 COL15A1P39059 1388 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 PLA2G4BP0C869 781 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 GREM2Q9H772 168 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 GID8Q9NWU2 228 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 MOSPD1Q9UJG1 213 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 G3BP2Q9UN86 482 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 APOL1O14791 398 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 GLI2P10070 1586 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 C16orf89Q6UX73 402 aa13.94□□□□□ -0.18
SYNGAP1-208ENST00000629380 SPICE1Q8N0Z3 855 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms