RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CCNA1P78396 465 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 ITIH3Q06033 890 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 H2AFVQ71UI9 128 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 EEPD1Q7L9B9 569 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 EXOC8Q8IYI6 725 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 OLIG1Q8TAK6 271 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 DEPTORQ8TB45 409 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 BBXQ8WY36 941 aaPredicted RBP23.91■■□□□ 1.42
PNKP-220ENST00000627232 OSBPL9Q96SU4 736 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 UBE2TQ9NPD8 197 aaPredicted RBP23.91■■□□□ 1.42
PNKP-220ENST00000627232 RAB21Q9UL25 225 aa23.91■■□□□ 1.42
PNKP-220ENST00000627232 ASB14A6NK59 587 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 ATP8B1O43520 1251 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 EXTL3O43909 919 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 ARIH2O95376 493 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 PNMA6AP0CW24 399 aaPredicted RBP23.9■■□□□ 1.42
PNKP-220ENST00000627232 CETPP11597 493 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 ARHGAP44Q17R89 818 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 SLFN12LQ6IEE8 588 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 CCDC62Q6P9F0 684 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 PLPPR4Q7Z2D5 763 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 ARHGEF19Q8IW93 802 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 LNX1Q8TBB1 728 aaPredicted RBP23.9■■□□□ 1.42
PNKP-220ENST00000627232 CAGE1Q8TC20 777 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 GPR20Q99678 358 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 TLR10Q9BXR5 811 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 ZNF446Q9NWS9 450 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 PLXNA1Q9UIW2 1896 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 MCM3APO60318 1980 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 PLXNB2O15031 1838 aa23.9■■□□□ 1.42
PNKP-220ENST00000627232 CCDC151A5D8V7 595 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 GAS2O43903 313 aaKnown RBP23.89■■□□□ 1.42
PNKP-220ENST00000627232 PALMO75781 387 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 GPC3P51654 580 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 FKBP1BP68106 108 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 CREG2Q8IUH2 290 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 U2AF1L4Q8WU68 220 aaKnown RBP23.89■■□□□ 1.42
PNKP-220ENST00000627232 CAPZA3Q96KX2 299 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 OGFRQ9NZT2 677 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.42
PNKP-220ENST00000627232 ZNF233A6NK53 670 aa23.89■■□□□ 1.41
PNKP-220ENST00000627232 FOXN3O00409 490 aaPredicted RBP23.89■■□□□ 1.41
PNKP-220ENST00000627232 ZRANB2O95218 330 aaKnown RBP eCLIP23.89■■□□□ 1.41
PNKP-220ENST00000627232 GTF2A2P52657 109 aa23.89■■□□□ 1.41
PNKP-220ENST00000627232 WDR78Q5VTH9 848 aa23.89■■□□□ 1.41
PNKP-220ENST00000627232 NOA1Q8NC60 698 aaKnown RBP23.89■■□□□ 1.41
PNKP-220ENST00000627232 RNF14Q9UBS8 474 aa23.89■■□□□ 1.41
PNKP-220ENST00000627232 LRRIQ4A6NIV6 560 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 K7ERI5 159 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 NOP56O00567 594 aaKnown RBP23.88■■□□□ 1.41
PNKP-220ENST00000627232 TNFAIP3P21580 790 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 MAP2K1Q02750 393 aaPredicted RBP23.88■■□□□ 1.41
PNKP-220ENST00000627232 MEI1Q5TIA1 1274 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 IER5Q5VY09 327 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 CC2D1AQ6P1N0 951 aaPredicted RBP23.88■■□□□ 1.41
PNKP-220ENST00000627232 DHX37Q8IY37 1157 aaKnown RBP23.88■■□□□ 1.41
PNKP-220ENST00000627232 FBXL13Q8NEE6 735 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 GPRC5AQ8NFJ5 357 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 TCP11Q8WWU5 503 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 CCDC127Q96BQ5 260 aa23.88■■□□□ 1.41
PNKP-220ENST00000627232 GRID2IPA4D2P6 1211 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 PDE2AO00408 941 aaPredicted RBP23.87■■□□□ 1.41
PNKP-220ENST00000627232 ZNF185O15231 689 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 LDHAP00338 332 aaKnown RBP23.87■■□□□ 1.41
PNKP-220ENST00000627232 SLC26A2P50443 739 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 MFAP3P55082 362 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 NFRKBQ6P4R8 1299 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 ATP8B4Q8TF62 1192 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 LMBR1Q8WVP7 490 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 HNRNPLLQ8WVV9 542 aaKnown RBP23.87■■□□□ 1.41
PNKP-220ENST00000627232 PSPC1Q8WXF1 523 aaKnown RBP23.87■■□□□ 1.41
PNKP-220ENST00000627232 MS4A4AQ96JQ5 239 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 FAM53CQ9NYF3 392 aa23.87■■□□□ 1.41
PNKP-220ENST00000627232 DIS3Q9Y2L1 958 aaKnown RBP23.87■■□□□ 1.41
PNKP-220ENST00000627232 NCANO14594 1321 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 ADCY3O60266 1144 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 ZC3H11AO75152 810 aaKnown RBP eCLIP23.86■■□□□ 1.41
PNKP-220ENST00000627232 CYP2C8P10632 490 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 CLDN10P78369 228 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 TTLL4Q14679 1199 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 PSMD6Q15008 389 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 ANKRD23Q86SG2 305 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 GLYCTKQ8IVS8 523 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 FBXO16Q8IX29 292 aaPredicted RBP23.86■■□□□ 1.41
PNKP-220ENST00000627232 SCFD2Q8WU76 684 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 SEMA4DQ92854 862 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 GLG1Q92896 1179 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 FAM81BQ96LP2 452 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 NT5C1BQ96P26 610 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 AGPAT1Q99943 283 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 FAM213AQ9BRX8 229 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 ARFGAP3Q9NP61 516 aa23.86■■□□□ 1.41
PNKP-220ENST00000627232 AGO2Q9UKV8 859 aaKnown RBP23.86■■□□□ 1.41
PNKP-220ENST00000627232 PDHXO00330 501 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 RHOXF2BP0C7M4 288 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 TMEM253P0C7T8 217 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 GCLCP48506 637 aaPredicted RBP23.85■■□□□ 1.41
PNKP-220ENST00000627232 EFNA5P52803 228 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 GALCP54803 685 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 CAPSQ13938 189 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms