RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GAD1Q99259 594 aa21.14■□□□□ 0.97
SMN1-211ENST00000625245 APOL6Q9BWW8 343 aa21.14■□□□□ 0.97
SMN1-211ENST00000625245 EIF2AQ9BY44 585 aaKnown RBP21.14■□□□□ 0.97
SMN1-211ENST00000625245 RNF39Q9H2S5 420 aa21.14■□□□□ 0.97
SMN1-211ENST00000625245 UBN1Q9NPG3 1134 aa21.14■□□□□ 0.97
SMN1-211ENST00000625245 TPCN1Q9ULQ1 816 aa21.14■□□□□ 0.97
SMN1-211ENST00000625245 IPPQ9Y573 584 aa21.14■□□□□ 0.97
SMN1-211ENST00000625245 FAM205CA6NFA0 338 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 INO80B-WBP1J3KQ70 363 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 PFKFB2O60825 505 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 LILRB3O75022 631 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 SOD2P04179 222 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 MYBP10242 640 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
SMN1-211ENST00000625245 ASTLQ6HA08 431 aaPredicted RBP21.13■□□□□ 0.97
SMN1-211ENST00000625245 TAS1R1Q7RTX1 841 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 SLFN12Q8IYM2 578 aa21.13■□□□□ 0.97
SMN1-211ENST00000625245 ORC3Q9UBD5 711 aaPredicted RBP21.13■□□□□ 0.97
SMN1-211ENST00000625245 TSPAN1O60635 241 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 SLITRK3O94933 977 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 PTENP60484 403 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 NR5A1Q13285 461 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 TFDP1Q14186 410 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 MXD4Q14582 209 aaPredicted RBP21.12■□□□□ 0.97
SMN1-211ENST00000625245 NOTUMQ6P988 496 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 COLGALT2Q8IYK4 626 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 FLCNQ8NFG4 579 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 HERC2P3Q9BVR0 1158 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 XPNPEP1Q9NQW7 623 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 MAN1C1Q9NR34 630 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 MARCH5Q9NX47 278 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 SSX2IPQ9Y2D8 614 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 HES2Q9Y543 173 aa21.12■□□□□ 0.97
SMN1-211ENST00000625245 PLXNA3P51805 1871 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 ZFHX2Q9C0A1 2572 aaPredicted RBP21.11■□□□□ 0.97
SMN1-211ENST00000625245 ARL5CA6NH57 179 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 ADH1AP07327 375 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 AXLP30530 894 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 KRT2P35908 639 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 MLH1P40692 756 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 SPIRE1Q08AE8 756 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 WASF1Q92558 559 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 CCDC43Q96MW1 224 aaKnown RBP21.11■□□□□ 0.97
SMN1-211ENST00000625245 RPS6KC1Q96S38 1066 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 EIF2AK1Q9BQI3 630 aaKnown RBP21.11■□□□□ 0.97
SMN1-211ENST00000625245 TRIM6Q9C030 488 aaPredicted RBP21.11■□□□□ 0.97
SMN1-211ENST00000625245 CSRNP2Q9H175 543 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 BRMS1Q9HCU9 246 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 MIOSQ9NXC5 875 aa21.11■□□□□ 0.97
SMN1-211ENST00000625245 NR1I2O75469 434 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 CTDNEP1O95476 244 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 SCNN1GP51170 649 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 TDGQ13569 410 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 PCBP1Q15365 356 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMN1-211ENST00000625245 ASAP3Q8TDY4 903 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 CCDC51Q96ER9 411 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 ZFP42Q96MM3 310 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 PCDHA12Q9UN75 941 aa21.1■□□□□ 0.97
SMN1-211ENST00000625245 CCDC195A0A1B0GUA6 201 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 TEX28O15482 410 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 GLUD2P49448 558 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 CLCN5P51795 746 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 CALCRLQ16602 461 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 ELMSAN1Q6PJG2 1045 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 C15orf39Q6ZRI6 1047 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 HACE1Q8IYU2 909 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 COLEC11Q9BWP8 271 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 KCNK12Q9HB15 430 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 FBXL21Q9UKT6 434 aa21.09■□□□□ 0.97
SMN1-211ENST00000625245 PTPRZ1P23471 2315 aaPredicted RBP21.09■□□□□ 0.97
SMN1-211ENST00000625245 USP34Q70CQ2 3546 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 A0A087WWV3 80 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 F8W810 466 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 GLUD1P00367 558 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 SPATA31D3P0C874 917 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 GBP2P32456 591 aaPredicted RBP21.08■□□□□ 0.97
SMN1-211ENST00000625245 FOSBP53539 338 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 MBTD1Q05BQ5 628 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 CAPSQ13938 189 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 KIAA0319Q5VV43 1072 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 SPATA31D4Q6ZUB0 917 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 CDR2LQ86X02 465 aaPredicted RBP21.08■□□□□ 0.97
SMN1-211ENST00000625245 NECAB1Q8N987 351 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 NXF3Q9H4D5 531 aaKnown RBP21.08■□□□□ 0.97
SMN1-211ENST00000625245 ANKEF1Q9NU02 776 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 DPP7Q9UHL4 492 aa21.08■□□□□ 0.97
SMN1-211ENST00000625245 MTCL1Q9Y4B5 1905 aaKnown RBP21.08■□□□□ 0.96
SMN1-211ENST00000625245 INPPL1O15357 1258 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 DGAT1O75907 488 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 ARF4P18085 180 aaPredicted RBP21.07■□□□□ 0.96
SMN1-211ENST00000625245 AKAP5P24588 427 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 TXKP42681 527 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 DSC1Q08554 894 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 ANKRD1Q15327 319 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 PALB2Q86YC2 1186 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 IFNLR1Q8IU57 520 aaPredicted RBP21.07■□□□□ 0.96
SMN1-211ENST00000625245 GLYCTKQ8IVS8 523 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 CMASQ8NFW8 434 aaPredicted RBP21.07■□□□□ 0.96
SMN1-211ENST00000625245 PIGOQ8TEQ8 1089 aa21.07■□□□□ 0.96
SMN1-211ENST00000625245 B3GALT6Q96L58 329 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms