RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 PRG3Q9Y2Y8 225 aaPredicted RBP26.51■■□□□ 1.83
CPSF1-214ENST00000622776 IPPQ9Y573 584 aa26.51■■□□□ 1.83
CPSF1-214ENST00000622776 SOD2P04179 222 aa26.5■■□□□ 1.83
CPSF1-214ENST00000622776 PTENP60484 403 aa26.5■■□□□ 1.83
CPSF1-214ENST00000622776 PCBP1Q15365 356 aaKnown RBP eCLIP26.5■■□□□ 1.83
CPSF1-214ENST00000622776 TPH2Q8IWU9 490 aa26.5■■□□□ 1.83
CPSF1-214ENST00000622776 COLGALT2Q8IYK4 626 aa26.5■■□□□ 1.83
CPSF1-214ENST00000622776 EIF2AQ9BY44 585 aaKnown RBP26.5■■□□□ 1.83
CPSF1-214ENST00000622776 MARCH5Q9NX47 278 aa26.5■■□□□ 1.83
CPSF1-214ENST00000622776 DENND4AQ7Z401 1863 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 SPTBN4Q9H254 2564 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 FAM205CA6NFA0 338 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 C2CD2LO14523 706 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 TSPAN1O60635 241 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 SLITRK3O94933 977 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 CTDNEP1O95476 244 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 URODP06132 367 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 AXLP30530 894 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 AK2P54819 239 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 MXD4Q14582 209 aaPredicted RBP26.49■■□□□ 1.83
CPSF1-214ENST00000622776 ASTLQ6HA08 431 aaPredicted RBP26.49■■□□□ 1.83
CPSF1-214ENST00000622776 C15orf39Q6ZRI6 1047 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 CCDC51Q96ER9 411 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 GAD1Q99259 594 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 HERC2P3Q9BVR0 1158 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 RNF39Q9H2S5 420 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 MFSD1Q9H3U5 465 aa26.49■■□□□ 1.83
CPSF1-214ENST00000622776 ORC3Q9UBD5 711 aaPredicted RBP26.49■■□□□ 1.83
CPSF1-214ENST00000622776 ARL5CA6NH57 179 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 INPPL1O15357 1258 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 OR1G1P47890 313 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 NOTUMQ6P988 496 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 TAS1R1Q7RTX1 841 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 RPS6KC1Q96S38 1066 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 SSX2IPQ9Y2D8 614 aa26.48■■□□□ 1.83
CPSF1-214ENST00000622776 CFAP54Q96N23 3096 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 INO80B-WBP1J3KQ70 363 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 NCBP1Q09161 790 aaKnown RBP26.47■■□□□ 1.83
CPSF1-214ENST00000622776 NR5A1Q13285 461 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 TFDP1Q14186 410 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 IFNLR1Q8IU57 520 aaPredicted RBP26.47■■□□□ 1.83
CPSF1-214ENST00000622776 CMASQ8NFW8 434 aaPredicted RBP26.47■■□□□ 1.83
CPSF1-214ENST00000622776 WASF1Q92558 559 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 CPB2Q96IY4 423 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 EIF2AK1Q9BQI3 630 aaKnown RBP26.47■■□□□ 1.83
CPSF1-214ENST00000622776 CSRNP2Q9H175 543 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 MIOSQ9NXC5 875 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 HES2Q9Y543 173 aa26.47■■□□□ 1.83
CPSF1-214ENST00000622776 C2orf16Q68DN1 1984 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 TEX28O15482 410 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 LYPLA2O95372 231 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 EFEMP2O95967 443 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 ADH1AP07327 375 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 MLH1P40692 756 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 CLCN5P51795 746 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 POU5F1BQ06416 359 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 DSC1Q08554 894 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 TDGQ13569 410 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 RNF168Q8IYW5 571 aaPredicted RBP26.46■■□□□ 1.83
CPSF1-214ENST00000622776 HSD17B14Q9BPX1 270 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 MAN1C1Q9NR34 630 aa26.46■■□□□ 1.83
CPSF1-214ENST00000622776 ARID2Q68CP9 1835 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 PROB1E7EW31 1015 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 KRT2P35908 639 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 GLUD2P49448 558 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 SCNN1GP51170 649 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 AMHR2Q16671 573 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 KIAA0319Q5VV43 1072 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 ASAP3Q8TDY4 903 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 TNFRSF25Q93038 417 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 ZFP42Q96MM3 310 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 APOL6Q9BWW8 343 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 KCNK12Q9HB15 430 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 ANKEF1Q9NU02 776 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 PCDHA12Q9UN75 941 aa26.45■■□□□ 1.82
CPSF1-214ENST00000622776 GLUD1P00367 558 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 FDPSP14324 419 aaKnown RBP26.44■■□□□ 1.82
CPSF1-214ENST00000622776 ARL2P36404 184 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 MBTD1Q05BQ5 628 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 CAPSQ13938 189 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 RXFP1Q9HBX9 757 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 BRMS1Q9HCU9 246 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 GIT1Q9Y2X7 761 aa26.44■■□□□ 1.82
CPSF1-214ENST00000622776 PLXNA3P51805 1871 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 F8W810 466 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 NR1I2O75469 434 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 DGAT1O75907 488 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 ARF4P18085 180 aaPredicted RBP26.43■■□□□ 1.82
CPSF1-214ENST00000622776 ELMSAN1Q6PJG2 1045 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 HACE1Q8IYU2 909 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 FLCNQ8NFG4 579 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 COLEC11Q9BWP8 271 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 TRIM6Q9C030 488 aaPredicted RBP26.43■■□□□ 1.82
CPSF1-214ENST00000622776 DPP7Q9UHL4 492 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 DUSP12Q9UNI6 340 aa26.43■■□□□ 1.82
CPSF1-214ENST00000622776 GVINP1Q7Z2Y8 2422 aa26.42■■□□□ 1.82
CPSF1-214ENST00000622776 CCDC195A0A1B0GUA6 201 aa26.42■■□□□ 1.82
CPSF1-214ENST00000622776 GLRA2P23416 452 aa26.42■■□□□ 1.82
CPSF1-214ENST00000622776 DSG1Q02413 1049 aa26.42■■□□□ 1.82
CPSF1-214ENST00000622776 ANKRD1Q15327 319 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms