RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	COG5	Q9UP83	839 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	USP15	Q9Y4E8	981 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	MYO15A	Q9UKN7	3530 aa		4.95	□□□□□ -1.62
LINC00649-219	ENST00000622171	MIA3	Q5JRA6	1907 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171		A0A0U1RQF3	1178 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ARL5C	A6NH57	179 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	TISP43	B9A030	160 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	FSCN2	O14926	492 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	TBX3	O15119	743 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	SLC16A4	O15374	487 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	HIP1R	O75146	1068 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	RECQL4	O94761	1208 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ASGR2	P07307	311 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ITGA4	P13612	1032 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	COL9A1	P20849	921 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ARL2	P36404	184 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	GUCY2F	P51841	1108 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PEX3	P56589	373 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PTEN	P60484	403 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAM189B	P81408	668 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZP2	Q05996	745 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ADAM15	Q13444	863 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	KARS	Q15046	597 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	DUSP6	Q16828	381 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	AAK1	Q2M2I8	961 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	LEXM	Q3ZCV2	418 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	LARP1B	Q659C4	914 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	TMC5	Q6UXY8	1006 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	USP49	Q70CQ1	688 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	OTUD6A	Q7L8S5	288 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAM178B	Q8IXR5	827 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	DAW1	Q8N136	415 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	GJD3	Q8N144	294 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	RASSF8	Q8NHQ8	419 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	DEPTOR	Q8TB45	409 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	URGCP	Q8TCY9	931 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	TCP11	Q8WWU5	503 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	MRPS27	Q92552	414 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	SYMPK	Q92797	1274 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	TMEM169	Q96HH4	297 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZBTB45	Q96K62	511 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	CLIC6	Q96NY7	704 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PNMA5	Q96PV4	448 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	FAM193B	Q96PV7	902 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	NAP1L4	Q99733	375 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	LLPH	Q9BRT6	129 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PANK2	Q9BZ23	570 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZBP1	Q9H171	429 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	FOXP1	Q9H334	677 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZHX3	Q9H4I2	956 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	PDZD7	Q9H5P4	517 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	AAAS	Q9NRG9	546 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	MARCH5	Q9NX47	278 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	DACT1	Q9NYF0	836 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	SPG21	Q9NZD8	308 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	ANKFY1	Q9P2R3	1169 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	RWDD3	Q9Y3V2	267 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	HCFC2	Q9Y5Z7	792 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	CLIC4	Q9Y696	253 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	SQOR	Q9Y6N5	450 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	WDR87	Q6ZQQ6	2873 aa		4.94	□□□□□ -1.62
LINC00649-219	ENST00000622171	C2orf71	A6NGG8	1288 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	NRP1	O14786	923 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	DKC1	O60832	514 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	CLASP2	O75122	1294 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	OBSL1	O75147	1896 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	RFPL2	O75678	378 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	DGAT1	O75907	488 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	KIF4A	O95239	1232 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	CXCL14	O95715	111 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	PDGFB	P01127	241 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	RPLP2	P05387	115 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	RB1	P06400	928 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	GALT	P07902	379 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	U2AF2	P26368	475 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	MATR3	P43243	847 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ALDH7A1	P49419	539 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	MAPK7	Q13164	816 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	SMAD4	Q13485	552 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	PRPF4B	Q13523	1007 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TFDP1	Q14186	410 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	MCM6	Q14566	821 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	SMC1A	Q14683	1233 aa	Known RBP	4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	PTPN14	Q15678	1187 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZNF568	Q3ZCX4	644 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZBTB41	Q5SVQ8	909 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ODR4	Q5SWX8	454 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	NT5DC1	Q5TFE4	455 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	NOTUM	Q6P988	496 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	SYCE2	Q6PIF2	218 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TAS1R3	Q7RTX0	852 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	SRGAP1	Q7Z6B7	1085 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	GPBP1	Q86WP2	473 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	CEP57	Q86XR8	500 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	PALB2	Q86YC2	1186 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	TEX2	Q8IWB9	1127 aa		4.93	□□□□□ -1.62
LINC00649-219	ENST00000622171	ZBTB8OS	Q8IWT0	167 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms