RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 FMO2Q99518 471 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 CBWD1Q9BRT8 395 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 TMEM109Q9BVC6 243 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 TMEM117Q9H0C3 514 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 VPS33BQ9H267 617 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 EPB41L4BQ9H329 900 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 PCIF1Q9H4Z3 704 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 ERVK-5Q9HDB9 667 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 CTTNBP2NLQ9P2B4 639 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 EXOC7Q9UPT5 735 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 SAMM50Q9Y512 469 aa10.37□□□□□ -0.75
IGHV3-54-201ENST00000622166 ASTN2O75129 1339 aaPredicted RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 TNS1Q9HBL0 1735 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 GMNCA6NCL1 334 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 DDX39AO00148 427 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 PODXLO00592 558 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 TRAPPC3O43617 180 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 LRRN2O75325 713 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 KIAA0754O94854 1291 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 SGPL1O95470 568 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 ADRB2P07550 413 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 GTF2H1P32780 548 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 GCLMP48507 274 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 FNTAP49354 379 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 MXI1P50539 228 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 GPC3P51654 580 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 JAK3P52333 1124 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 MFAP3P55082 362 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 PSMC5P62195 406 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 MRPS9P82933 396 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 ZNF211Q13398 564 aaPredicted RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 DRP2Q13474 957 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 NOP9Q86U38 636 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 HOOK3Q86VS8 718 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 RTKN2Q8IZC4 609 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 PRELID2Q8N945 189 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 C12orf50Q8NA57 414 aaPredicted RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 AGBL3Q8NEM8 1001 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 SYTL5Q8TDW5 730 aaPredicted RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 SPIRE2Q8WWL2 714 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 LPAR1Q92633 364 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 PGM2Q96G03 612 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 MFSD14AQ96MC6 490 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 KREMEN1Q96MU8 473 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 SENP7Q9BQF6 1050 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 RABEP2Q9H5N1 569 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 CNOT10Q9H9A5 744 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 SEPT11Q9NVA2 429 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 GRHL1Q9NZI5 618 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 CNOT8Q9UFF9 292 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 CNOT7Q9UIV1 285 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 GTF3C4Q9UKN8 822 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 NOVA2Q9UNW9 492 aaKnown RBP10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 PCDHA3Q9Y5H8 950 aa10.36□□□□□ -0.75
IGHV3-54-201ENST00000622166 ARID2Q68CP9 1835 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 WDR81Q562E7 1941 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 TISP43B9A030 160 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 NFIBO00712 420 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 BACH1O14867 736 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SLC16A4O15374 487 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 COMTP21964 271 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 YWHABP31946 246 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SFNP31947 248 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 CDR1P51861 262 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SEC24CP53992 1094 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 PMS2P54278 862 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 KRT76Q01546 638 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 FMO1Q01740 532 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 CDR2Q01850 454 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SPP2Q13103 211 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 PRPF4BQ13523 1007 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 RASA3Q14644 834 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 ZYXQ15942 572 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 KRT71Q3SY84 523 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SEL1L2Q5TEA6 688 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 XRRA1Q6P2D8 792 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 MAP4K3Q8IVH8 894 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SUGP1Q8IWZ8 645 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 CNPY4Q8N129 248 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 OTUD6BQ8N6M0 293 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 KRT35Q92764 455 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 KAT5Q92993 513 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 MAGOHBQ96A72 148 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 FBXL18Q96ME1 805 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 GLIS2Q9BZE0 524 aaPredicted RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 TMEM39BQ9GZU3 492 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 PABPC3Q9H361 631 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 TMEM8AQ9HCN3 771 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 UVRAGQ9P2Y5 699 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
IGHV3-54-201ENST00000622166 COL4A5P29400 1685 aa10.34□□□□□ -0.75
IGHV3-54-201ENST00000622166 PHF20L1A8MW92 1017 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms