RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 UBE2OQ9C0C9 1292 aaKnown RBP12□□□□□ -0.49
POLR2J3-221ENST00000621093 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
POLR2J3-221ENST00000621093 COL4A6Q14031 1691 aa12□□□□□ -0.49
POLR2J3-221ENST00000621093 RALGAPA2Q2PPJ7 1873 aa12□□□□□ -0.49
POLR2J3-221ENST00000621093 CEP290O15078 2479 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 A0A1B0GUA9 196 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 C9IYK1 514 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ABLIM1O14639 778 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 EIF3DO15371 548 aaKnown RBP eCLIP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ACTN1P12814 892 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ZSCAN20P17040 1043 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 AXLP30530 894 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 WDR5P61964 334 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 MORC3Q14149 939 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 KLHL40Q2TBA0 621 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 CCDC183Q5T5S1 534 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ZNF658Q5TYW1 1059 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 NOTUMQ6P988 496 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 SLC17A8Q8NDX2 589 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 HERVK_113Q902F9 699 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 HVCN1Q96D96 273 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 FTHL17Q9BXU8 183 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 PTPRHQ9HD43 1115 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 CHST12Q9NRB3 414 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 RGS18Q9NS28 235 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 RMND1Q9NWS8 449 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 TNFSF13BQ9Y275 285 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 HES2Q9Y543 173 aa11.99□□□□□ -0.49
POLR2J3-221ENST00000621093 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 MEIS3P2A8K0S8 358 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 HNRNPDLO14979 420 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 N4BP3O15049 544 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 TGFB1I1O43294 461 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 UPP2O95045 317 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 PIGRP01833 764 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 ATF7P17544 494 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 PTMSP20962 102 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 PROZP22891 400 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 PRCPP42785 496 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 LIG4P49917 911 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 ALCAMQ13740 583 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 PCBP1Q15365 356 aaKnown RBP eCLIP11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 BMT2Q1RMZ1 405 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 SEZ6Q53EL9 994 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 FAM117BQ6P1L5 589 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 RBM43Q6ZSC3 357 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 ECHDC2Q86YB7 292 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 CEP120Q8N960 986 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 SMG8Q8ND04 991 aaKnown RBP11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 LPPQ93052 612 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 CDT1Q9H211 546 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 RNF39Q9H2S5 420 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
POLR2J3-221ENST00000621093 NLRC5Q86WI3 1866 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 UBE4BO95155 1302 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 CLIC2O15247 247 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 BAIAP3O94812 1187 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 ADSSP30520 456 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 MATR3P43243 847 aaKnown RBP eCLIP11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 GATMP50440 423 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 FAM189BP81408 668 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 KNOP1Q1ED39 458 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 ZNF568Q3ZCX4 644 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 ZBTB41Q5SVQ8 909 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 RASIP1Q5U651 963 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 FAM109BQ6ICB4 259 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 SLC27A1Q6PCB7 646 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 MPZL3Q6UWV2 235 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 ZPBP2Q6X784 338 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 STXBP4Q6ZWJ1 553 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 SLC24A5Q71RS6 500 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 TMEM192Q8IY95 271 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 RNF169Q8NCN4 708 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 RNPC3Q96LT9 517 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 TCHPQ9BT92 498 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 APOL6Q9BWW8 343 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 CXCL16Q9H2A7 254 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 PRO3102Q9H379 93 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 KCTD10Q9H3F6 313 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 SEMA6BQ9H3T3 888 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 NXF3Q9H4D5 531 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 PCIF1Q9H4Z3 704 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 C1orf112Q9NSG2 853 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 RNF19AQ9NV58 838 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 EXOC7Q9UPT5 735 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 IPPQ9Y573 584 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 PCDHB2Q9Y5E7 798 aa11.97□□□□□ -0.49
POLR2J3-221ENST00000621093 A0A0U1RQF3 1178 aa11.96□□□□□ -0.49
POLR2J3-221ENST00000621093 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms