RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CEP85LQ5SZL2 805 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 C9orf131Q5VYM1 1079 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 PADI6Q6TGC4 694 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 SDCCAG8Q86SQ7 713 aaPredicted RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 DNAAF3Q8N9W5 541 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 IRS2Q9Y4H2 1338 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 LRRD1A4D1F6 860 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 IQCA1LA6NCM1 817 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 IFNAR2P48551 515 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TTMPQ5BVD1 217 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 ALS2CLQ60I27 953 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 RWDD4Q6NW29 188 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 MICALCLQ6ZW33 695 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 BHMTQ93088 406 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 MAGOHBQ96A72 148 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 ACCSQ96QU6 501 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 RPF1Q9H9Y2 349 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC38A10Q9HBR0 1119 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 A6NJR5 290 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 PJA2O43164 708 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 LCA5LO95447 670 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 CYP11B2P19099 503 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 CORO7P57737 925 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 YWHAGP61981 247 aaKnown RBP eCLIP8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 NAB2Q15742 525 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 MAPK6Q16659 721 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 ACER1Q8TDN7 264 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 TMEM143Q96AN5 459 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 CHMP6Q96FZ7 201 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 EDEM3Q9BZQ6 932 aa8.87□□□□□ -0.99
PTPDC1-204ENST00000620992 EIF3HO15372 352 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 EDIL3O43854 480 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 MED24O75448 989 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GCFC2P16383 781 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 POLR2BP30876 1174 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 CASP5P51878 434 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 IRX4P78413 519 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC12A1Q13621 1099 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 HADHQ16836 314 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 ASTE1Q2TB18 679 aaPredicted RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 NBPF9Q3BBW0 867 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 HHATQ5VTY9 493 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 TRIM59Q8IWR1 403 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 RILPQ96NA2 401 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 HEMGNQ9BXL5 484 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 G3BP2Q9UN86 482 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 FIS1Q9Y3D6 152 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GVINP1Q7Z2Y8 2422 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 RAD51CO43502 376 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GGPS1O95749 300 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF131P52739 623 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 PSMC6P62333 389 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GUCY1A3Q02108 690 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 TMTC4Q5T4D3 741 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 RNF149Q8NC42 400 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 AGBL1Q96MI9 1066 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 MMP19Q99542 508 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 MIS12Q9H081 205 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 SIK2Q9H0K1 926 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 ZWILCHQ9H900 591 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 PCSK1NQ9UHG2 260 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 LAMB2P55268 1798 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 COL22A1Q8NFW1 1626 aaPredicted RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 CCL15-CCL14A0A0B4J2E2 113 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 SGK1O00141 431 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 CLGNO14967 610 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 CSDE1O75534 798 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 MAPK4P31152 587 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 INPP5BP32019 993 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 SLCO1A2P46721 670 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 CCL15Q16663 113 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GLE1Q53GS7 698 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GNASQ5JWF2 1037 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 ALKBH5Q6P6C2 394 aaKnown RBP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 DDX42Q86XP3 938 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 RFX6Q8HWS3 928 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 SIX6OS1Q8N1H7 587 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 CASKIN2Q8WXE0 1202 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 AKT1S1Q96B36 256 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 RNF14Q9UBS8 474 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 MYO3BQ8WXR4 1341 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 MYH1P12882 1939 aa8.86□□□□□ -0.99
PTPDC1-204ENST00000620992 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 CAPN15O75808 1086 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 IL1R1P14778 569 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ECE1P42892 770 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 MTM1Q13496 603 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ZCWPW2Q504Y3 356 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 HP1BP3Q5SSJ5 553 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 EFCAB13Q8IY85 973 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 RNF139Q8WU17 664 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ATG4CQ96DT6 458 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF70Q9UC06 446 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 TBK1Q9UHD2 729 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 KIAA0100Q14667 2235 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms