RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 PFKFB2O60825 505 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 RNGTTO60942 597 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 PAEPP09466 180 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 ZSCAN22P10073 491 aaPredicted RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 ATF7P17544 494 aaPredicted RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 HSD17B4P51659 736 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 BPIFB3P59826 476 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 NCOA4Q13772 614 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 TUSC1Q2TAM9 212 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 WDR44Q5JSH3 913 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 KIAA1614Q5VZ46 1190 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 LMBRD2Q68DH5 695 aaPredicted RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 ATL3Q6DD88 541 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 HIBCHQ6NVY1 386 aaPredicted RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 ZNF449Q6P9G9 518 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 DSTYKQ6XUX3 929 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 RPGRQ92834 1020 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 CEP19Q96LK0 163 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 GBP5Q96PP8 586 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CRNKL1Q9BZJ0 848 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 SHCBP1LQ9BZQ2 653 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CEP44Q9C0F1 390 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 SUGCTQ9HAC7 445 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 SCPEP1Q9HB40 452 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.47□□□□□ -1.53
MATR3-228ENST00000620916 ZMYND8Q9ULU4 1186 aaPredicted RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 LRCH1Q9Y2L9 728 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 TRIM64A6NGJ6 449 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 TRIM64BA6NI03 449 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 MYCP01106 439 aaPredicted RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 PSMA4P25789 261 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 CDC25CP30307 473 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 NR2C2P49116 596 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 TMED10P49755 219 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 GNA13Q14344 377 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 METTL21CQ5VZV1 264 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CCDC102BQ68D86 513 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 SNRNP48Q6IEG0 339 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 NOP9Q86U38 636 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 CCDC83Q8IWF9 413 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CD302Q8IX05 232 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CHPFQ8IZ52 775 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 DHX58Q96C10 678 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 SPACA7Q96KW9 195 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 SPATA17Q96L03 361 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 TTC1Q99614 292 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 TTPALQ9BTX7 342 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 FTOQ9C0B1 505 aaKnown RBP eCLIP5.47□□□□□ -1.53
MATR3-228ENST00000620916 CCSER2Q9H7U1 834 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 EHMT1Q9H9B1 1298 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 VTA1Q9NP79 307 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 LNPEPQ9UIQ6 1025 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 RPL26L1Q9UNX3 145 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 HBS1LQ9Y450 684 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 TLL2Q9Y6L7 1015 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 FER1L6Q2WGJ9 1857 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 CENPBD1B2RD01 187 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 E7EVH7 732 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 H0YIN7 160 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 FBP2O00757 339 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 ITGBL1O95965 494 aaPredicted RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 KRT6AP02538 564 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 KRT6BP04259 564 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 PHKG2P15735 406 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 ZNF16P17020 682 aaPredicted RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 RPL9P32969 192 aaKnown RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 HSPA9P38646 679 aaKnown RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 MAPKAPK2P49137 400 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 SNX16P57768 344 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 CDK18Q07002 472 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 MAP3K12Q12852 859 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 DNAJC3Q13217 504 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 ITGB3BPQ13352 177 aaPredicted RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 DCTN2Q13561 401 aaKnown RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 RASGRF1Q13972 1273 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 KPNB1Q14974 876 aaKnown RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 EAPPQ56P03 285 aaPredicted RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 ANO5Q75V66 913 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 SPATA2LQ8IUW3 424 aaPredicted RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 NUP93Q8N1F7 819 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 HCAR2Q8TDS4 363 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 PGBD4Q96DM1 585 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 RRP36Q96EU6 259 aaKnown RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 LTV1Q96GA3 475 aaPredicted RBP5.46□□□□□ -1.53
MATR3-228ENST00000620916 CENPKQ9BS16 269 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 PLEKHA5Q9HAU0 1116 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 DLGAP2Q9P1A6 1054 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 TRIM10Q9UDY6 481 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 DDX19BQ9UMR2 479 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 DNAJC16Q9Y2G8 782 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 USP16Q9Y5T5 823 aa5.46□□□□□ -1.53
MATR3-228ENST00000620916 A0A087WZG4 1122 aa5.46□□□□□ -1.54
MATR3-228ENST00000620916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.46□□□□□ -1.54
MATR3-228ENST00000620916 SMIM31A0A1B0GVY4 71 aa5.46□□□□□ -1.54
MATR3-228ENST00000620916 NBPF26B4DH59 902 aa5.46□□□□□ -1.54
MATR3-228ENST00000620916 RASA4BC9J798 803 aa5.46□□□□□ -1.54
MATR3-228ENST00000620916 HIP1O00291 1037 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms