RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 WASHC5Q12768 1159 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 BFSP2Q13515 415 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TAB1Q15750 504 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 RABGAP1LQ5R372 815 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 TMC5Q6UXY8 1006 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 RSRC2Q7L4I2 434 aaKnown RBP7.59□□□□□ -1.19
COLCA1-205ENST00000620864 PROM2Q8N271 834 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 ABHD8Q96I13 439 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 CCT7Q99832 543 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 NRBP2Q9NSY0 501 aa7.59□□□□□ -1.19
COLCA1-205ENST00000620864 A2ML1A8K2U0 1454 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 DPYSL4O14531 572 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 ANGPT2O15123 496 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 EIF3HO15372 352 aaKnown RBP eCLIP7.59□□□□□ -1.2
COLCA1-205ENST00000620864 BNIP3LO60238 219 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 PDE9AO76083 593 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 MARK3P27448 753 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 MAGOHP61326 146 aaKnown RBP7.59□□□□□ -1.2
COLCA1-205ENST00000620864 TRIP4Q15650 581 aaPredicted RBP7.59□□□□□ -1.2
COLCA1-205ENST00000620864 AGBL2Q5U5Z8 902 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 ANGPTL8Q6UXH0 198 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 EME1Q96AY2 570 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 ZSWIM6Q9HCJ5 1215 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 UBA2Q9UBT2 640 aaPredicted RBP7.59□□□□□ -1.2
COLCA1-205ENST00000620864 TUBGCP4Q9UGJ1 667 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 APPL1Q9UKG1 709 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 PCDHA7Q9UN72 937 aa7.59□□□□□ -1.2
COLCA1-205ENST00000620864 MAP3K15Q6ZN16 1313 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 USP17L3A6NCW0 530 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 USP17L4A6NCW7 530 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CELF2O95319 508 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 MOCS3O95396 460 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 USP17L1Q7RTZ2 530 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 IFNLR1Q8IU57 520 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 TEKT4Q8WW24 435 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 DDX25Q9UHL0 483 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CHMP2BQ9UQN3 213 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM32AQ9Y421 112 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 XPO1O14980 1071 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 RXRAP19793 462 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM45BPQ6NSW5 357 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ARMCX2Q7L311 632 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 GPR141Q7Z602 305 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 METTL23Q86XA0 190 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 TINF2Q9BSI4 451 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 TRIM54Q9BYV2 358 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 PLEKHA4Q9H4M7 779 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 MTMR6Q9Y217 621 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CALB1P05937 261 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SLC9A5Q14940 896 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 LRRC49Q8IUZ0 686 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 DDX56Q9NY93 547 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ERVK-7P63135 1459 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 PNMA8CA0A1B0GUJ8 204 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 E7EWF7 191 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SUPT3HO75486 399 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 NR2F2P24468 414 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 GNL1P36915 607 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 DSG1Q02413 1049 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 PGBD3Q8N328 593 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 C8orf58Q8NAV2 365 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 MAGED4Q96JG8 741 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 GPR101Q96P66 508 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SYTL2Q9HCH5 934 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CD209Q9NNX6 404 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SPATA31D1Q6ZQQ2 1576 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CAMSAP1Q5T5Y3 1602 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 NFIBO00712 420 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 VAMP4O75379 141 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 DLGAP3O95886 979 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 TAP1Q03518 808 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 C11orf88Q6PI97 169 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 MTHFD1LQ6UB35 978 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM43BQ6ZT52 329 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 GET4Q7L5D6 327 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ADAT2Q7Z6V5 191 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SEPT1Q8WYJ6 367 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SNF8Q96H20 258 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 TRIM62Q9BVG3 475 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ARMT1Q9H993 441 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 DKK3Q9UBP4 350 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 USP15Q9Y4E8 981 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 TRIM17Q9Y577 477 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM25AB3EWG3 89 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM25CB3EWG5 89 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 FAM25GB3EWG6 89 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ZBTB7BO15156 539 aaPredicted RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CAND2O75155 1236 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 SLCO1A2P46721 670 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ELOAQ14241 798 aaKnown RBP7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CCDC142Q17RM4 750 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 CC2D2BQ6DHV5 1058 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 ITPRIPL1Q6GPH6 555 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 NLRP9Q7RTR0 991 aa7.58□□□□□ -1.2
COLCA1-205ENST00000620864 HIPK4Q8NE63 616 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms