RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PP2D1A8MPX8 630 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 EIF3FO00303 357 aaPredicted RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 STRNO43815 780 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 ZPR1O75312 459 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CALM1P0DP23 149 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CALM2P0DP24 149 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CALM3P0DP25 149 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 SERPINB3P29508 390 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 RGS2P41220 211 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 ACADVLP49748 655 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 AP1B1Q10567 949 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CYLC2Q14093 348 aaPredicted RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 ARL6IP4Q66PJ3 421 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 LRRC74BQ6ZQY2 392 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS11-207ENST00000620429 GPIHBP1Q8IV16 184 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 KLHL7Q8IXQ5 586 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 PPFIBP2Q8ND30 876 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 MPP4Q96JB8 637 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CNOT6LQ96LI5 555 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 DUSP9Q99956 384 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 NOC4LQ9BVI4 516 aaKnown RBP11.11□□□□□ -0.63
VPS11-207ENST00000620429 NRDE2Q9H7Z3 1164 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 TLE6Q9H808 572 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 TIMMDC1Q9NPL8 285 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 ARHGEF38Q9NXL2 777 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 AIPL1Q9NZN9 384 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 BTBD7Q9P203 1132 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 DOCK2Q92608 1830 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
VPS11-207ENST00000620429 MAGEB6P1A0A0J9YX57 407 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 KLRC4O43908 158 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 SCG2P13521 617 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 USP11P51784 963 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 EMP3P54852 163 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 UBE4AQ14139 1066 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 CCDC6Q16204 474 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 NAALADL2Q58DX5 795 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 TNFAIP8L3Q5GJ75 292 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 SLC10A5Q5PT55 438 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 MIGA2Q7L4E1 593 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 GIMAP8Q8ND71 665 aaPredicted RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 ZNF184Q99676 751 aaPredicted RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 ARHGAP20Q9P2F6 1191 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 KLHL14Q9P2G3 628 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 LAMB2P55268 1798 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 ENTPD5O75356 428 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 VEGFAP15692 232 aaPredicted RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 UBA7P41226 1012 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 SLC34A1Q06495 639 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 MGAT5Q09328 741 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 SPIDRQ14159 915 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 CAVIN4Q5BKX8 364 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 ZNF280DQ6N043 979 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 PHLDB3Q6NSJ2 640 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 C2CD5Q86YS7 1000 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 BHMTQ93088 406 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 RIOK1Q9BRS2 568 aaKnown RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 TBC1D10AQ9BXI6 508 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
VPS11-207ENST00000620429 MYPNQ86TC9 1320 aa11.1□□□□□ -0.63
VPS11-207ENST00000620429 TCP11X1B4DZS4 312 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 AKR1B10O60218 316 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 UBTFL6P0CB48 400 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 TXKP42681 527 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 MAGEA1P43355 309 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 IFNAR2P48551 515 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 RASSF2P50749 326 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 PDCD4Q53EL6 469 aaKnown RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 ZNF362Q5T0B9 420 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 C6orf118Q5T5N4 469 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 MEI1Q5TIA1 1274 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 NELFCDQ8IXH7 590 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 ST13P4Q8IZP2 240 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 RIBC1Q8N443 379 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 LSM14AQ8ND56 463 aaKnown RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 P2RX5Q93086 422 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 TMEM109Q9BVC6 243 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 STMN4Q9H169 189 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 RGS16O15492 202 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 PIM1P11309 404 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 CCNE1P24864 410 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 HALP42357 657 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 SPTY2D1Q68D10 685 aaPredicted RBP11.09□□□□□ -0.63
VPS11-207ENST00000620429 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
VPS11-207ENST00000620429 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms