RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PCBP1Q15365 356 aaKnown RBP eCLIP8.79□□□□□ -1
CPNE3-209ENST00000620393 TRIM71Q2Q1W2 868 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 FAM26DQ5JW98 314 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 SLFN12LQ6IEE8 588 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 ZPBP2Q6X784 338 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 IRF2BP1Q8IU81 584 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 SLC9A9Q8IVB4 645 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 WNT8BQ93098 351 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 PRIMPOLQ96LW4 560 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 CEP63Q96MT8 703 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 TOX2Q96NM4 488 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 PPP1R16BQ96T49 567 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 ACO2Q99798 780 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 TARS2Q9BW92 718 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 MRPL4Q9BYD3 311 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 IKZF4Q9H2S9 585 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 AGPAT3Q9NRZ7 376 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 NOD1Q9Y239 953 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 GINS2Q9Y248 185 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 USP20Q9Y2K6 914 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 STYXL1Q9Y6J8 313 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 ZMYM2Q9UBW7 1377 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 LRRC10BA6NIK2 292 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 M0QZ92 97 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 KIAA0391O15091 583 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 CSDE1O75534 798 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 TOM1L1O75674 476 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 SLC34A2O95436 690 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 GNA14O95837 355 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 CD4P01730 458 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 CHRNA1P02708 482 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 GARTP22102 1010 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 NR2F2P24468 414 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 ADSSP30520 456 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 THPOP40225 353 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 LIG4P49917 911 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 NCBP1Q09161 790 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 MGAT3Q09327 533 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 PRPF4BQ13523 1007 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 SNX17Q15036 470 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 AMHR2Q16671 573 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 CDKAL1Q5VV42 579 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 SLC39A4Q6P5W5 647 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 LRRC55Q6ZSA7 311 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 TSHZ1Q6ZSZ6 1077 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 ANKRD33Q7Z3H0 272 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 FAM126BQ8IXS8 530 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 BICD1Q96G01 975 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 EEF2KMTQ96G04 330 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 PAWRQ96IZ0 340 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 ZBTB45Q96K62 511 aaPredicted RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 SCLT1Q96NL6 688 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 OSMRQ99650 979 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 PTPRHQ9HD43 1115 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 TRPV2Q9Y5S1 764 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 CDY2AQ9Y6F7 541 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 SQORQ9Y6N5 450 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 MYH9P35579 1960 aaKnown RBP8.78□□□□□ -1
CPNE3-209ENST00000620393 MROH7Q68CQ1 1323 aa8.78□□□□□ -1
CPNE3-209ENST00000620393 SCN10AQ9Y5Y9 1956 aa8.77□□□□□ -1
CPNE3-209ENST00000620393 A0A0B4J269 797 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 A0A1B0GUA9 196 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 DCDC2CA8MYV0 355 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TISP43B9A030 160 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 HNRNPDLO14979 420 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TLR3O15455 904 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 EXOC3O60645 756 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 EDN1P05305 212 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 CKBP12277 381 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 ATP1A3P13637 1013 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 PROZP22891 400 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 EEF1GP26641 437 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 PSMC2P35998 433 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 FANCCQ00597 558 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TLE2Q04725 743 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 SPAG1Q07617 926 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 RBL2Q08999 1139 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 BFSP2Q13515 415 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TCP11X2Q5H9J9 407 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 ZNF618Q5T7W0 954 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 ATF7IP2Q5U623 682 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 ARMCX5Q6P1M9 558 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 CATSPER4Q7RTX7 472 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 NECAB2Q7Z6G3 386 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 FRMD5Q7Z6J6 570 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 FAM114A1Q8IWE2 563 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 XXYLT1Q8NBI6 393 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 CAGE1Q8TC20 777 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 DIS3LQ8TF46 1054 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TMEM40Q8WWA1 233 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 POMGNT1Q8WZA1 660 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 CBWD1Q9BRT8 395 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TCHPQ9BT92 498 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 PCIF1Q9H4Z3 704 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 C11orf49Q9H6J7 331 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms