RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LPPQ93052 612 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 MRPL38Q96DV4 380 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 CPB2Q96IY4 423 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 C11orf84Q9BUA3 381 aaPredicted RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 STRA6Q9BX79 667 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 MRPL9Q9BYD2 267 aaKnown RBP9.1□□□□□ -0.95
NEK3-209ENST00000618856 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 HCSTQ9UBK5 93 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 TNFSF13BQ9Y275 285 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 GIT1Q9Y2X7 761 aa9.1□□□□□ -0.95
NEK3-209ENST00000618856 MYMKA6NI61 221 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 K7ERI5 159 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 GRM6O15303 877 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 PIGRP01833 764 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 ITGB1P05556 798 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 PRKCBP05771 671 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 LAG3P18627 525 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 DNAJB1P25685 340 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 CTNNB1P35222 781 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 TXLNAP40222 546 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 UBE3AQ05086 875 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 DMP1Q13316 513 aaPredicted RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 PRPF4BQ13523 1007 aaKnown RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 CSPP1Q1MSJ5 1256 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 PAN2Q504Q3 1202 aaKnown RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 FOXD4L5Q5VV16 416 aaPredicted RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 RRAGBQ5VZM2 374 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 GLB1LQ6UWU2 654 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 ZPBP2Q6X784 338 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 GPBP1Q86WP2 473 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 COLGALT1Q8NBJ5 622 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 HELQQ8TDG4 1101 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 ACO2Q99798 780 aaKnown RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 CUEDC2Q9H467 287 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 RSAD1Q9HA92 442 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 PARVGQ9HBI0 331 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 KMT5AQ9NQR1 393 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 TBC1D13Q9NVG8 400 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 LARSQ9P2J5 1176 aaKnown RBP9.09□□□□□ -0.95
NEK3-209ENST00000618856 MTUS1Q9ULD2 1270 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 LZTS1Q9Y250 596 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 ATG2AQ2TAZ0 1938 aa9.09□□□□□ -0.95
NEK3-209ENST00000618856 PRRC2BQ5JSZ5 2229 aaKnown RBP9.08□□□□□ -0.96
NEK3-209ENST00000618856 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 ARL5CA6NH57 179 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 H0YCG3 227 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 FSCN2O14926 492 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 N4BP3O15049 544 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 B4GALT3O60512 393 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 PPP1R37O75864 691 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 SSBP05455 408 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEK3-209ENST00000618856 ITGA4P13612 1032 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 SMTNP53814 917 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 GTF2BQ00403 316 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 DSC1Q08554 894 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 RAD51AP2Q09MP3 1159 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 NAB2Q15742 525 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 XKR4Q5GH76 650 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 NOMO2Q5JPE7 1267 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 ATF7IP2Q5U623 682 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 EEF1DP3Q658K8 133 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 ADALQ6DHV7 355 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 KCNT2Q6UVM3 1135 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 ALKAL1Q6UXT8 129 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 SV2BQ7L1I2 683 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 CDR2LQ86X02 465 aaPredicted RBP9.08□□□□□ -0.96
NEK3-209ENST00000618856 ABI1Q8IZP0 508 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 SLC39A11Q8N1S5 342 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 KLHL23Q8NBE8 558 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 LEO1Q8WVC0 666 aaPredicted RBP9.08□□□□□ -0.96
NEK3-209ENST00000618856 DDX12PQ92771 950 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 CHAMP1Q96JM3 812 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 TNMDQ9H2S6 317 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 NXF3Q9H4D5 531 aaKnown RBP9.08□□□□□ -0.96
NEK3-209ENST00000618856 NRDE2Q9H7Z3 1164 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 MIOSQ9NXC5 875 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 KANSL3Q9P2N6 904 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 USP20Q9Y2K6 914 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 HES2Q9Y543 173 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 ATP6V1DQ9Y5K8 247 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
NEK3-209ENST00000618856 PLXNA4Q9HCM2 1894 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 CCDC169A6NNP5 214 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 SLC16A4O15374 487 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 MEFVO15553 781 aaPredicted RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 GTPBP6O43824 516 aaPredicted RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 TRAK2O60296 914 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 FAM189A1O60320 539 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 FGF18O76093 207 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 DDHD2O94830 711 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 NPTXRO95502 500 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 GALTP07902 379 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 MCF2P10911 925 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 IGFBP4P22692 258 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms