RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 CASRP41180 1078 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 USP14P54578 494 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 WNT3AP56704 352 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 PABPC4Q13310 644 aaKnown RBP eCLIP4.41□□□□□ -1.7
TARDBP-220ENST00000618606 SF3A1Q15459 793 aaKnown RBP4.41□□□□□ -1.7
TARDBP-220ENST00000618606 NFE2L2Q16236 605 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 GPRIN1Q7Z2K8 1008 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 EFHBQ8N7U6 833 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 SUPT20HQ8NEM7 779 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 OR5M3Q8NGP4 307 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 NELL1Q92832 810 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 ZNF496Q96IT1 587 aaPredicted RBP4.41□□□□□ -1.7
TARDBP-220ENST00000618606 SLC46A2Q9BY10 475 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 CPEB1Q9BZB8 566 aaKnown RBP4.41□□□□□ -1.7
TARDBP-220ENST00000618606 MTFR1LQ9H019 292 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 USP36Q9P275 1121 aaKnown RBP4.41□□□□□ -1.7
TARDBP-220ENST00000618606 DKK2Q9UBU2 259 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 PCDHB6Q9Y5E3 794 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 FAM83GA6ND36 823 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 ZNF185O15231 689 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 TGM5O43548 720 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 PCDH8O95206 1070 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 PFKMP08237 780 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 POU3F2P20265 443 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-220ENST00000618606 GPR15P49685 360 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 GZMKP49863 264 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 FAM189BP81408 668 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 DSG1Q02413 1049 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 HDGFL2Q7Z4V5 671 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-220ENST00000618606 LILRA3Q8N6C8 439 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-220ENST00000618606 CDYL2Q8N8U2 506 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 SH3TC2Q8TF17 1288 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 IL17RAQ96F46 866 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 DCLRE1CQ96SD1 692 aaKnown RBP4.4□□□□□ -1.71
TARDBP-220ENST00000618606 FDXACB1Q9BRP7 624 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-220ENST00000618606 SERHL2Q9H4I8 314 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 TMEM260Q9NX78 707 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 PODXL2Q9NZ53 605 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 EIF2B4Q9UI10 523 aaKnown RBP4.4□□□□□ -1.71
TARDBP-220ENST00000618606 INSL6Q9Y581 213 aa4.4□□□□□ -1.71
TARDBP-220ENST00000618606 A0A1W2PR48 441 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 TYRP1P17643 537 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 PRR16Q569H4 304 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 CCDC178Q5BJE1 867 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 GPR158Q5T848 1215 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 ESPNLQ6ZVH7 1005 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 PASD1Q8IV76 773 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 ARHGEF19Q8IW93 802 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 NXPE1Q8N323 547 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 SYNPOQ8N3V7 929 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 CHTF18Q8WVB6 975 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 GAB3Q8WWW8 586 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 FAM193BQ96PV7 902 aaPredicted RBP4.39□□□□□ -1.71
TARDBP-220ENST00000618606 SYBUQ9NX95 663 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 CLCA2Q9UQC9 943 aa4.39□□□□□ -1.71
TARDBP-220ENST00000618606 GAGE12BA1L429 117 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 GAGE12HA6NDE8 117 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 LPXNO60711 386 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 GAS7O60861 476 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 ASMTLO95671 621 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 APOBEC3AP31941 199 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-220ENST00000618606 AVPR1BP47901 424 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 ZBTB41Q5SVQ8 909 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 DRICH1Q6PGQ1 229 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-220ENST00000618606 GDF7Q7Z4P5 450 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 MSL3Q8N5Y2 521 aaKnown RBP4.38□□□□□ -1.71
TARDBP-220ENST00000618606 FAM98AQ8NCA5 519 aaKnown RBP4.38□□□□□ -1.71
TARDBP-220ENST00000618606 COQ10AQ96MF6 247 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 DNAJC2Q99543 621 aaKnown RBP4.38□□□□□ -1.71
TARDBP-220ENST00000618606 WDR11Q9BZH6 1224 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 EPC1Q9H2F5 836 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 MSRAQ9UJ68 235 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 TMPRSS11EQ9UL52 423 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 FRMD4BQ9Y2L6 1034 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 CHST2Q9Y4C5 530 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 EPN1Q9Y6I3 576 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-220ENST00000618606 NUMBLQ9Y6R0 609 aa4.38□□□□□ -1.71
TARDBP-220ENST00000618606 PRSS38A1L453 326 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 LEFTY2O00292 366 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 RNASET2O00584 256 aaKnown RBP4.37□□□□□ -1.71
TARDBP-220ENST00000618606 NRP2O60462 931 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 CTGFP29279 349 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 BMPR1AP36894 532 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 ELLP55199 621 aaPredicted RBP4.37□□□□□ -1.71
TARDBP-220ENST00000618606 PHC1P78364 1004 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 DUSP2Q05923 314 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 BMS1Q14692 1282 aaKnown RBP4.37□□□□□ -1.71
TARDBP-220ENST00000618606 UBE3CQ15386 1083 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 ERCC6LQ2NKX8 1250 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 CCDC62Q6P9F0 684 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 XYLT1Q86Y38 959 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 LCORLQ8N3X6 602 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 ZNF610Q8N9Z0 462 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 LINC00476Q8WZB0 136 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 RSAD1Q9HA92 442 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 AKIP1Q9NQ31 210 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 TRPM5Q9NZQ8 1165 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 USP18Q9UMW8 372 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 HDAC5Q9UQL6 1122 aa4.37□□□□□ -1.71
TARDBP-220ENST00000618606 ZNF891A8MT65 544 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms