RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PPP2R5CQ13362 524 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 NCAPHQ15003 741 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 CASC4Q6P4E1 433 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 CATSPERGQ6ZRH7 1159 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 SIX6OS1Q8N1H7 587 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 TARS2Q9BW92 718 aaKnown RBP14.87□□□□□ -0.03
CIITA-213ENST00000618327 PPP1R12CQ9BZL4 782 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 VPS37BQ9H9H4 285 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 EPB41L5Q9HCM4 733 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 A1CFQ9NQ94 594 aaKnown RBP14.87□□□□□ -0.03
CIITA-213ENST00000618327 LRRD1A4D1F6 860 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 GAS2O43903 313 aaKnown RBP14.87□□□□□ -0.03
CIITA-213ENST00000618327 SLITRK3O94933 977 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 GBP1P32455 592 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 KLK7P49862 253 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 RWDD2BP57060 319 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 E2F4Q16254 413 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 RSRC2Q7L4I2 434 aaKnown RBP14.87□□□□□ -0.03
CIITA-213ENST00000618327 LMNTD2Q8IXW0 634 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 CCDC110Q8TBZ0 833 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 PIN4Q9Y237 131 aaKnown RBP14.87□□□□□ -0.03
CIITA-213ENST00000618327 FHOD1Q9Y613 1164 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 MIF4GDA9UHW6 222 aaKnown RBP14.86□□□□□ -0.03
CIITA-213ENST00000618327 H7C0C1 242 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 PIK3CDO00329 1044 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 CYP26A1O43174 497 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 SCP2P22307 547 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 OAS2P29728 719 aaKnown RBP14.86□□□□□ -0.03
CIITA-213ENST00000618327 ATP5OP48047 213 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 SARNPP82979 210 aaKnown RBP14.86□□□□□ -0.03
CIITA-213ENST00000618327 SCFD1Q8WVM8 642 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 TRIM7Q9C029 511 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
CIITA-213ENST00000618327 ZSCAN26Q16670 478 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 BBOF1Q8ND07 529 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 NLGN2Q8NFZ4 835 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 RABEP2Q9H5N1 569 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 BLOC1S4Q9NUP1 217 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 TGFB3P10600 412 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 GUCY2CP25092 1073 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 ATP11AP98196 1134 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 SLC18A3Q16572 532 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 NME8Q8N427 588 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 AGPAT1Q99943 283 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 CALN1Q9BXU9 219 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 SRGAP2O75044 1071 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 CALB1P05937 261 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 SNX1Q13596 522 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 METTL7BQ6UX53 244 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 ZNF720Q7Z2F6 126 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 FAM114A2Q9NRY5 505 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 PRMT7Q9NVM4 692 aaPredicted RBP14.86□□□□□ -0.03
CIITA-213ENST00000618327 SSX2IPQ9Y2D8 614 aa14.86□□□□□ -0.03
CIITA-213ENST00000618327 PABPN1LA6NDY0 278 aaKnown RBP14.85□□□□□ -0.03
CIITA-213ENST00000618327 IRF6O14896 467 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CLGNO14967 610 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 NPTX2P47972 431 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CDKAL1Q5VV42 579 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 BSPRYQ5W0U4 402 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 RAD9BQ6WBX8 426 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 TTC39CQ8N584 583 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 KCNMB3Q9NPA1 279 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 DBR1Q9UK59 544 aaKnown RBP14.85□□□□□ -0.03
CIITA-213ENST00000618327 EML1O00423 815 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 EXTL3O43909 919 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 PRPSAP2O60256 369 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 FGGP02679 453 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 WDR72Q3MJ13 1102 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 KIAA0895Q8NCT3 520 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 AP1M1Q9BXS5 423 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 PLCB1Q9NQ66 1216 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CYP2C9P11712 490 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 PSMA2P25787 234 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CNTN2Q02246 1040 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 TMEM62Q0P6H9 643 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CEP85LQ5SZL2 805 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 KIAA1841Q6NSI8 718 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 SH3RF1Q7Z6J0 888 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CACNA2D3Q8IZS8 1091 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 ZNF564Q8TBZ8 553 aaPredicted RBP14.85□□□□□ -0.03
CIITA-213ENST00000618327 HAS1Q92839 578 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 CALR3Q96L12 384 aaKnown RBP14.85□□□□□ -0.03
CIITA-213ENST00000618327 DDX23Q9BUQ8 820 aaKnown RBP14.85□□□□□ -0.03
CIITA-213ENST00000618327 PARD6BQ9BYG5 372 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 TMEM8AQ9HCN3 771 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 OLFML3Q9NRN5 406 aa14.85□□□□□ -0.03
CIITA-213ENST00000618327 SPEF2Q9C093 1822 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 RRN3P2A6NIE6 340 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 P4HA2O15460 535 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 EVI5O60447 810 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 RGS2P41220 211 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 ALDH5A1P51649 535 aaPredicted RBP14.84□□□□□ -0.03
CIITA-213ENST00000618327 NCOA4Q13772 614 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 TRIM72Q6ZMU5 477 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 TAOK1Q7L7X3 1001 aa14.84□□□□□ -0.03
CIITA-213ENST00000618327 MTMR14Q8NCE2 650 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms