RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 KCNG1Q9UIX4 513 aa18.81■□□□□ 0.6
PCDHGC3-205ENST00000617641 NENFQ9UMX5 172 aa18.81■□□□□ 0.6
PCDHGC3-205ENST00000617641 FOXN3O00409 490 aaPredicted RBP18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 MAFO75444 373 aaPredicted RBP18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 LGR5O75473 907 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 RFX1P22670 979 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 ANXA13P27216 316 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 CCNA1P78396 465 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 C10orf76Q5T2E6 689 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 ARMCX2Q7L311 632 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 LNX1Q8TBB1 728 aaPredicted RBP18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 TMC2Q8TDI7 906 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 SEMA4DQ92854 862 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 FAM167AQ96KS9 214 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 DAAM1Q9Y4D1 1078 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 SIP14410 1827 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 ASB14A6NK59 587 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 PMM2O15305 246 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 ADORA2AP29274 412 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 ABCD1P33897 745 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 CLCN6P51797 869 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 CAPSQ13938 189 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 MMS19Q96T76 1030 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 SNX12Q9UMY4 172 aa18.8■□□□□ 0.6
PCDHGC3-205ENST00000617641 K7ERI5 159 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 NCK2O43639 380 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 DLATP10515 647 aaKnown RBP18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 BMS1Q14692 1282 aaKnown RBP18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 U2AF1L4Q8WU68 220 aaKnown RBP18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 BBXQ8WY36 941 aaPredicted RBP18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 KAT5Q92993 513 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 TMEM8AQ9HCN3 771 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 PLXNB2O15031 1838 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 EDN1P05305 212 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 TTLL4Q14679 1199 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZNF792Q3KQV3 632 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 KRT39Q6A163 491 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 GLYCTKQ8IVS8 523 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 NOA1Q8NC60 698 aaKnown RBP18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZBTB45Q96K62 511 aaPredicted RBP18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 FAM84AQ96KN4 292 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 SYT11Q9BT88 431 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 HAPLN2Q9GZV7 340 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
PCDHGC3-205ENST00000617641 PLXNA1Q9UIW2 1896 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZBTB42B2RXF5 422 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PALMO75781 387 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 CELF2O95319 508 aaKnown RBP18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PLCB4Q15147 1175 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 GJC2Q5T442 439 aaPredicted RBP18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 NFRKBQ6P4R8 1299 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 SLC30A5Q8TAD4 765 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 ATP8B4Q8TF62 1192 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PRPF31Q8WWY3 499 aaKnown RBP18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 TARS2Q9BW92 718 aaKnown RBP18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PARD6BQ9BYG5 372 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 LOC102724159A0A0B4J2E5 919 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZNF233A6NK53 670 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 EXTL3O43909 919 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 KIF22Q14807 665 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PWP2Q15269 919 aaKnown RBP18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PLPPR4Q7Z2D5 763 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 ANKRD23Q86SG2 305 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 TAS1R2Q8TE23 839 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 KCNN1Q92952 543 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PSMB7Q99436 277 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 SUGCTQ9HAC7 445 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 STYXL1Q9Y6J8 313 aa18.78■□□□□ 0.6
PCDHGC3-205ENST00000617641 PDE2AO00408 941 aaPredicted RBP18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 PIGRP01833 764 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 CCDC172P0C7W6 258 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 NLRP11P59045 1033 aaKnown RBP18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 FKBP1BP68106 108 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 FMNL3Q8IVF7 1028 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 LRRC71Q8N4P6 559 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 C2orf69Q8N8R5 385 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 COG1Q8WTW3 980 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 TRAPPC12Q8WVT3 735 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 ELMO3Q96BJ8 720 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 TLR10Q9BXR5 811 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 ANKZF1Q9H8Y5 726 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 ZNF446Q9NWS9 450 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 AGO2Q9UKV8 859 aaKnown RBP18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 COQ4Q9Y3A0 265 aa18.77■□□□□ 0.6
PCDHGC3-205ENST00000617641 BTNL10A8MVZ5 291 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 ADCY3O60266 1144 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 FTCDO95954 541 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 ACOT2P49753 483 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 SV2AQ7L0J3 742 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 USP37Q86T82 979 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 PPM1KQ8N3J5 372 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 CAGE1Q8TC20 777 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 PSPC1Q8WXF1 523 aaKnown RBP18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 KREMEN1Q96MU8 473 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 ANKFY1Q9P2R3 1169 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 DIS3Q9Y2L1 958 aaKnown RBP18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 HYOU1Q9Y4L1 999 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms