RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CYP2B6P20813 491 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 HNRNPH3P31942 346 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 ARL2P36404 184 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 ARHGAP1Q07960 439 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 DRAP1Q14919 205 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 SLC9C1Q4G0N8 1177 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 IFNL1Q8IU54 200 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 SCFD2Q8WU76 684 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 ZBTB9Q96C00 473 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 MAML3Q96JK9 1138 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 MPHOSPH6Q99547 160 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 EIF3CQ99613 913 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 NIFKQ9BYG3 293 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 TMEM117Q9H0C3 514 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 INTS2Q9H0H0 1204 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 ARHGAP28Q9P2N2 729 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 MYH10P35580 1976 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 ASB14A6NK59 587 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 LRRIQ3A6PVS8 624 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 KIF2AO00139 706 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 FOXN3O00409 490 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 CLSTN1O94985 981 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 ZBTB48P10074 688 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 MAGEA1P43355 309 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 NAP1L1P55209 391 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 ASIC2Q16515 512 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 KCTD19Q17RG1 926 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 ASTE1Q2TB18 679 aaPredicted RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 RASAL3Q86YV0 1011 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 SLC9A9Q8IVB4 645 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 CCDC170Q8IYT3 715 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 LMO3Q8TAP4 145 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 GOLGA5Q8TBA6 731 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 PARK7Q99497 189 aaKnown RBP8.47□□□□□ -1.05
NEK3-207ENST00000617054 TCHPQ9BT92 498 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 MKNK1Q9BUB5 465 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 CRISPLD2Q9H0B8 497 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 GOLPH3Q9H4A6 298 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 PDE11AQ9HCR9 933 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 GINS2Q9Y248 185 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 CAPN6Q9Y6Q1 641 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 UBE4BO95155 1302 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 PHLPP2Q6ZVD8 1323 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 LOXHD1Q8IVV2 1947 aa8.47□□□□□ -1.05
NEK3-207ENST00000617054 GOLGA6L9A6NEM1 432 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 B4GALT5O43286 388 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 ATP1A1P05023 1023 aaKnown RBP8.46□□□□□ -1.05
NEK3-207ENST00000617054 IQCF3P0C7M6 154 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 INSRRP14616 1297 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 TNFSF9P41273 254 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 FKBP1BP68106 108 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 KRT83P78385 493 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 TMEM62Q0P6H9 643 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 LAMTOR4Q0VGL1 99 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 STRN3Q13033 797 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 ELF2Q15723 593 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 EFCAB12Q6NXP0 572 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 INTS8Q75QN2 995 aaKnown RBP8.46□□□□□ -1.05
NEK3-207ENST00000617054 PLEKHH3Q7Z736 793 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 SHCBP1Q8NEM2 672 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 PARD3BQ8TEW8 1205 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 TIPINQ9BVW5 301 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 ST6GALNAC4Q9H4F1 302 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 MINDY3Q9H8M7 445 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 SEPT11Q9NVA2 429 aaKnown RBP8.46□□□□□ -1.05
NEK3-207ENST00000617054 CHORDC1Q9UHD1 332 aaPredicted RBP8.46□□□□□ -1.05
NEK3-207ENST00000617054 ARID2Q68CP9 1835 aa8.46□□□□□ -1.05
NEK3-207ENST00000617054 ZNF185O15231 689 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 EVI5O60447 810 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 MAFO75444 373 aaPredicted RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 SLU7O95391 586 aaKnown RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 VTNP04004 478 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 SERPING1P05155 500 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 GCLCP48506 637 aaPredicted RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 NCBP1Q09161 790 aaKnown RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 KIF5AQ12840 1032 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 NFIL3Q16649 462 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 PPM1KQ8N3J5 372 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 TAS1R2Q8TE23 839 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 AFAP1L1Q8TED9 768 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 ZNF516Q92618 1163 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 TINF2Q9BSI4 451 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 GPR88Q9GZN0 384 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 KATNBL1Q9H079 304 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 ABT1Q9ULW3 272 aaKnown RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 EXOC7Q9UPT5 735 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 PTPRJQ12913 1337 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 DYNC1LI2O43237 492 aaPredicted RBP8.46□□□□□ -1.06
NEK3-207ENST00000617054 LGALS2P05162 132 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 CXCR5P32302 372 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 GTF2F1P35269 517 aaKnown RBP eCLIP8.46□□□□□ -1.06
NEK3-207ENST00000617054 VAV2P52735 878 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 ALCAMQ13740 583 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 GRB14Q14449 540 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 FAM110CQ1W6H9 321 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 PALB2Q86YC2 1186 aa8.46□□□□□ -1.06
NEK3-207ENST00000617054 EHBP1Q8NDI1 1231 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms