RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SMAD1Q15797 465 aaKnown RBP12.6□□□□□ -0.39
CDH5-208ENST00000614547 DAB2IPQ5VWQ8 1189 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 TTC1Q99614 292 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 TYW1Q9NV66 732 aaKnown RBP12.6□□□□□ -0.39
CDH5-208ENST00000614547 ZFATQ9P243 1243 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 SCOCQ9UIL1 159 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDH5-208ENST00000614547 EMSYQ7Z589 1322 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ARHGAP42A6NI28 874 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 PPIP5K2O43314 1243 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 RIPK2O43353 540 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ZCCHC18P0CG32 403 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 TROVE2P10155 538 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDH5-208ENST00000614547 GHRP10912 638 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 PYGMP11217 842 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 EPHB2P29323 1055 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ITGA8P53708 1063 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 IRX4P78413 519 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ARHGAP4P98171 946 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 CNGA2Q16280 664 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 FRMD5Q7Z6J6 570 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ANKMY2Q8IV38 441 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 NEDD1Q8NHV4 660 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 RILPQ96NA2 401 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 AGPAT1Q99943 283 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
CDH5-208ENST00000614547 PCNTO95613 3336 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 ATRNO75882 1429 aa12.6□□□□□ -0.39
CDH5-208ENST00000614547 MGRN1O60291 552 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 ENTPD5O75356 428 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 FMO5P49326 533 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 AUHQ13825 339 aaKnown RBP12.59□□□□□ -0.39
CDH5-208ENST00000614547 ITIH4Q14624 930 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 EXOC3L1Q86VI1 746 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 LNX1Q8TBB1 728 aaPredicted RBP12.59□□□□□ -0.39
CDH5-208ENST00000614547 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 SLCO1B3Q9NPD5 702 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 LCA5LO95447 670 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 SBK1Q52WX2 424 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 RMDN2Q96LZ7 410 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 PARVGQ9HBI0 331 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 ANKRD63C9JTQ0 380 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 H0YGN5 161 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 KIAA0391O15091 583 aaKnown RBP12.59□□□□□ -0.39
CDH5-208ENST00000614547 ASAP2O43150 1006 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 TTLL1O95922 423 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 COILP38432 576 aaPredicted RBP12.59□□□□□ -0.39
CDH5-208ENST00000614547 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 RHOT2Q8IXI1 618 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 SLFN12Q8IYM2 578 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 CYP2W1Q8TAV3 490 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 TTC17Q96AE7 1141 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 CARD9Q9H257 536 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 NFS1Q9Y697 457 aa12.59□□□□□ -0.39
CDH5-208ENST00000614547 GYG2O15488 501 aa12.58□□□□□ -0.39
CDH5-208ENST00000614547 SEPT2Q15019 361 aa12.58□□□□□ -0.39
CDH5-208ENST00000614547 DAGLBQ8NCG7 672 aa12.58□□□□□ -0.39
CDH5-208ENST00000614547 DNAJC9Q8WXX5 260 aa12.58□□□□□ -0.39
CDH5-208ENST00000614547 MAML1Q92585 1016 aa12.58□□□□□ -0.39
CDH5-208ENST00000614547 KAT5Q92993 513 aa12.58□□□□□ -0.39
CDH5-208ENST00000614547 KITP10721 976 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 CD58P19256 250 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 RFC5P40937 340 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 WLSQ5T9L3 541 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
CDH5-208ENST00000614547 FITM2Q8N6M3 262 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 C3orf20Q8ND61 904 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 SLC8A3P57103 927 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 CDR2Q01850 454 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 IZUMO3Q5VZ72 239 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 LMBRD2Q68DH5 695 aaPredicted RBP12.58□□□□□ -0.4
CDH5-208ENST00000614547 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 TTC8Q8TAM2 541 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 FAM84AQ96KN4 292 aa12.58□□□□□ -0.4
CDH5-208ENST00000614547 TISP43B9A030 160 aa12.57□□□□□ -0.4
CDH5-208ENST00000614547 PPFIA2O75334 1257 aa12.57□□□□□ -0.4
CDH5-208ENST00000614547 MXI1P50539 228 aa12.57□□□□□ -0.4
CDH5-208ENST00000614547 KLC1Q07866 573 aa12.57□□□□□ -0.4
CDH5-208ENST00000614547 SPARCL1Q14515 664 aa12.57□□□□□ -0.4
CDH5-208ENST00000614547 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
CDH5-208ENST00000614547 ZNF572Q7Z3I7 529 aaPredicted RBP12.57□□□□□ -0.4
CDH5-208ENST00000614547 FBXO11Q86XK2 927 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms