RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ZPBP2Q6X784 338 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 VSTM4Q8IW00 320 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 TRMT13Q9NUP7 481 aaKnown RBP15.05■□□□□ -0
TMEM254-213ENST00000613758 TAB2Q9NYJ8 693 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 HSPBP1Q9NZL4 362 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 IMPACTQ9P2X3 320 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 NOD1Q9Y239 953 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 FRMD4BQ9Y2L6 1034 aa15.05■□□□□ -0
TMEM254-213ENST00000613758 SLC16A3O15427 465 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 EXOC3O60645 756 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 GARTP22102 1010 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 PSMC2P35998 433 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 COPB1P53618 953 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 LRMPQ12912 555 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 PRPF4BQ13523 1007 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 PTPN21Q16825 1174 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 SLFN12LQ6IEE8 588 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 POMGNT1Q8WZA1 660 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 WNT8BQ93098 351 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 OSMRQ99650 979 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 ACO2Q99798 780 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 TUBGCP2Q9BSJ2 902 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 VPS16Q9H269 839 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 STYXL1Q9Y6J8 313 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 EPB41P11171 864 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 DARSP14868 501 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 CRYBB1P53674 252 aaPredicted RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 MARSP56192 900 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 MRPS6P82932 125 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 PTK7Q13308 1070 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 AMHR2Q16671 573 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 FILIP1LQ4L180 1135 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 FRMD5Q7Z6J6 570 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 RPAINQ86UA6 219 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 ZBTB45Q96K62 511 aaPredicted RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 SEZ6LQ9BYH1 1024 aa15.04■□□□□ -0
TMEM254-213ENST00000613758 CELF4Q9BZC1 486 aaKnown RBP15.04■□□□□ -0
TMEM254-213ENST00000613758 CENPFP49454 3210 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 B4GALT5O43286 388 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 RPLP2P05387 115 aaKnown RBP15.03■□□□□ -0
TMEM254-213ENST00000613758 LRRC8AQ8IWT6 810 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 FAM186BQ8IYM0 893 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 PRIMPOLQ96LW4 560 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 MKNK1Q9BUB5 465 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 TRPV6Q9H1D0 765 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 PRDM10Q9NQV6 1147 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 PYCARDQ9ULZ3 195 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 SIP14410 1827 aa15.03■□□□□ -0
TMEM254-213ENST00000613758 M0QZ92 97 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 N4BP3O15049 544 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 TEX33O43247 280 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 ZNF500O60304 480 aaPredicted RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 TOM1L1O75674 476 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 TPM2P07951 284 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 PRKCSHP14314 528 aaPredicted RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 EIF4BP23588 611 aaKnown RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 MATR3P43243 847 aaKnown RBP eCLIP15.02■□□□□ -0
TMEM254-213ENST00000613758 CDK7P50613 346 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 SNX17Q15036 470 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 TMEM132AQ24JP5 1023 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 ATF7IP2Q5U623 682 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 TSHZ1Q6ZSZ6 1077 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 RDH13Q8NBN7 331 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 ZSWIM2Q8NEG5 633 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 SAAL1Q96ER3 474 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 TCHPQ9BT92 498 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 NOC4LQ9BVI4 516 aaKnown RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 SENP6Q9GZR1 1112 aaPredicted RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 METTL14Q9HCE5 456 aaKnown RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 ANKFY1Q9P2R3 1169 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 ARMCX3Q9UH62 379 aaPredicted RBP15.02■□□□□ -0
TMEM254-213ENST00000613758 CDY2AQ9Y6F7 541 aa15.02■□□□□ -0
TMEM254-213ENST00000613758 A0A0B4J269 797 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 GOLGA8IPA6NC78 632 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 GOLGA8JA6NMD2 632 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 CLDN3O15551 220 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 ERLIN2O94905 339 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 FGFR4P22455 802 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 THPOP40225 353 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 GJA8P48165 433 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 MNX1P50219 401 aaPredicted RBP15.02□□□□□ -0.01
TMEM254-213ENST00000613758 TRIM59Q8IWR1 403 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 DHX38Q92620 1227 aaKnown RBP15.02□□□□□ -0.01
TMEM254-213ENST00000613758 BORCS6Q96GS4 357 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 HAPLN2Q9GZV7 340 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 RTN4Q9NQC3 1192 aaKnown RBP15.02□□□□□ -0.01
TMEM254-213ENST00000613758 TNFSF13BQ9Y275 285 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 TRPV2Q9Y5S1 764 aa15.02□□□□□ -0.01
TMEM254-213ENST00000613758 KIAA0391O15091 583 aaKnown RBP15.01□□□□□ -0.01
TMEM254-213ENST00000613758 B4GALT4O60513 344 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 CLCN1P35523 988 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 PBX1P40424 430 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 TBX2Q13207 712 aaPredicted RBP15.01□□□□□ -0.01
TMEM254-213ENST00000613758 MAN2A1Q16706 1144 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 CATSPER4Q7RTX7 472 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 TMEM40Q8WWA1 233 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 MSTO1Q9BUK6 570 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 PTPRHQ9HD43 1115 aa15.01□□□□□ -0.01
TMEM254-213ENST00000613758 AGO2Q9UKV8 859 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms