RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 STAG3L1P0CL83 205 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 HOXA11P31270 313 aaPredicted RBP14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 KCNB1Q14721 858 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 TCTN1Q2MV58 587 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 ATF7IP2Q5U623 682 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 SLC27A1Q6PCB7 646 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 MAP4K3Q8IVH8 894 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 HACE1Q8IYU2 909 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 DEFB123Q8N688 67 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 LINC01599Q8WXQ3 324 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 RSPH1Q8WYR4 309 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 GSDMAQ96QA5 445 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 ELAC1Q9H777 363 aaKnown RBP14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 CXXC1Q9P0U4 656 aaPredicted RBP14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 TBX20Q9UMR3 447 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 EXOC7Q9UPT5 735 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 TRIP11Q15643 1979 aa14.25□□□□□ -0.13
SRGAP2C-204ENST00000613462 C9IYK1 514 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 HNRNPDLO14979 420 aaKnown RBP14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 HOXA2O43364 376 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 KLRC4O43908 158 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 MGEA5O60502 916 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 ZNF623O75123 536 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 RHOBTB3O94955 611 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 EOMESO95936 686 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 CASP1P29466 404 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 NMT1P30419 496 aaKnown RBP14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 DCAF4L1Q3SXM0 396 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 L1TD1Q5T7N2 865 aaKnown RBP14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 TAS1R3Q7RTX0 852 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 NPAS4Q8IUM7 802 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 BICD1Q96G01 975 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 ACCSQ96QU6 501 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 STRA6Q9BX79 667 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 TRIM6Q9C030 488 aaPredicted RBP14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 FAM105AQ9NUU6 356 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 TMEM161AQ9NX61 479 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 LRFN2Q9ULH4 789 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 TNFSF13BQ9Y275 285 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 KIAA1671Q9BY89 1806 aa14.24□□□□□ -0.13
SRGAP2C-204ENST00000613462 ZMYM2Q9UBW7 1377 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 ANK1P16157 1881 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 B4GALT5O43286 388 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 TOM1L1O75674 476 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 KIF20AO95235 890 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 PIGRP01833 764 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 LIG4P49917 911 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 FAM189BP81408 668 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 DEFB103AP81534 67 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 PNOCQ13519 176 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 LRIT3Q3SXY7 679 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 KMT5BQ4FZB7 885 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 NT5DC1Q5TFE4 455 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 SPATA20Q8TB22 786 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 PGBD4Q96DM1 585 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 CPB2Q96IY4 423 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 ACO2Q99798 780 aaKnown RBP14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 PDZD7Q9H5P4 517 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 TBC1D7Q9P0N9 293 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 PCDHB7Q9Y5E2 793 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 PCDHB2Q9Y5E7 798 aa14.23□□□□□ -0.13
SRGAP2C-204ENST00000613462 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 GJB5O95377 273 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 MYBP10242 640 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 CASP5P51878 434 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 BMT2Q1RMZ1 405 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 ZC2HC1CQ53FD0 456 aaPredicted RBP14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 SLFN12LQ6IEE8 588 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 MPZL3Q6UWV2 235 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 ECHDC2Q86YB7 292 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 HERC6Q8IVU3 1022 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 NUP62CLQ9H1M0 184 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 CLSTN2Q9H4D0 955 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 UBN1Q9NPG3 1134 aa14.22□□□□□ -0.13
SRGAP2C-204ENST00000613462 EDN1P05305 212 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 MCF2P10911 925 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 PROZP22891 400 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 SNRPFP62306 86 aaKnown RBP14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 SMAD3P84022 425 aaKnown RBP14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 NOLC1Q14978 699 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 RAB30Q15771 203 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 KYAT1Q16773 422 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 SKOR2Q2VWA4 1001 aaPredicted RBP14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 ZNF568Q3ZCX4 644 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 UBXN11Q5T124 520 aa14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 MRPL10Q7Z7H8 261 aaKnown RBP14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 ZNF598Q86UK7 904 aaKnown RBP14.21□□□□□ -0.13
SRGAP2C-204ENST00000613462 SYCP3Q8IZU3 236 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms