RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 GADD45BO75293 160 aaPredicted RBP18.26■□□□□ 0.51
IRF1-211ENST00000613424 NPTXRO95502 500 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 ASIC1P78348 528 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 TAP1Q03518 808 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 STRN3Q13033 797 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 CUL4BQ13620 913 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 ZNF697Q5TEC3 545 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 ATF7IP2Q5U623 682 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 EEF1DP3Q658K8 133 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 PPP2R2DQ66LE6 453 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 CCDC65Q8IXS2 484 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 SMG8Q8ND04 991 aaKnown RBP18.26■□□□□ 0.51
IRF1-211ENST00000613424 LPPQ93052 612 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 TARS2Q9BW92 718 aaKnown RBP18.26■□□□□ 0.51
IRF1-211ENST00000613424 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
IRF1-211ENST00000613424 SEMA6BQ9H3T3 888 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 ZNF576Q9H609 170 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 TBC1D7Q9P0N9 293 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 TBX20Q9UMR3 447 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 IPPQ9Y573 584 aa18.26■□□□□ 0.51
IRF1-211ENST00000613424 TMEM265A0A087WTH1 108 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 TBKBP1A7MCY6 615 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 MEIS3P2A8K0S8 358 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 HOXA2O43364 376 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 SCP2P22307 547 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 GTF2BQ00403 316 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 SNW1Q13573 536 aaKnown RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 BTG3Q14201 252 aaPredicted RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 PAN2Q504Q3 1202 aaKnown RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 ZC2HC1CQ53FD0 456 aaPredicted RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 CLLU1OSQ5K130 101 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 AGMOQ6ZNB7 445 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 KRBA2Q6ZNG9 492 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 Q7L0L9 218 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 CMTR2Q8IYT2 770 aaKnown RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 FMR1NBQ8N0W7 255 aaPredicted RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 TMEM87AQ8NBN3 555 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 SLC17A8Q8NDX2 589 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 CNNM3Q8NE01 707 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 ENGASEQ8NFI3 743 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 PGBD4Q96DM1 585 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 CASD1Q96PB1 797 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 TRIM6Q9C030 488 aaPredicted RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 ST6GALNAC4Q9H4F1 302 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 MRPL44Q9H9J2 332 aaKnown RBP18.25■□□□□ 0.51
IRF1-211ENST00000613424 TNFSF13BQ9Y275 285 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 HES2Q9Y543 173 aa18.25■□□□□ 0.51
IRF1-211ENST00000613424 COASYQ13057 564 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 UNC13DQ70J99 1090 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 SPRED2Q7Z698 418 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 FIBCD1Q8N539 461 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 HELQQ8TDG4 1101 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 ADPGKQ9BRR6 497 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 STRA6Q9BX79 667 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 TMEM117Q9H0C3 514 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 PTPRHQ9HD43 1115 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 OLFML3Q9NRN5 406 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 COL4A6Q14031 1691 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
IRF1-211ENST00000613424 FNDC1Q4ZHG4 1894 aaPredicted RBP18.23■□□□□ 0.51
IRF1-211ENST00000613424 OFD1O75665 1012 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 ITGA4P13612 1032 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 ABCD1P33897 745 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 ZPBP2Q6X784 338 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 CLEC17AQ6ZS10 378 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 ABI1Q8IZP0 508 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 DEFB123Q8N688 67 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 HPS3Q969F9 1004 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 ZBTB45Q96K62 511 aaPredicted RBP18.23■□□□□ 0.51
IRF1-211ENST00000613424 TGS1Q96RS0 853 aaKnown RBP18.23■□□□□ 0.51
IRF1-211ENST00000613424 FGFBP2Q9BYJ0 223 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 NXF3Q9H4D5 531 aaKnown RBP18.23■□□□□ 0.51
IRF1-211ENST00000613424 CERS4Q9HA82 394 aa18.23■□□□□ 0.51
IRF1-211ENST00000613424 PVALEFA0A1B0GWK0 134 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 ABLIM1O14639 778 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 GTPBP6O43824 516 aaPredicted RBP18.22■□□□□ 0.51
IRF1-211ENST00000613424 PPP1R37O75864 691 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 GCNT3O95395 438 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 PROZP22891 400 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 ERVK-21P61565 698 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 FAM160A1Q05DH4 1040 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 DCAF4L1Q3SXM0 396 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 MAP4K3Q8IVH8 894 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 BICD1Q96G01 975 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 C17orf80Q9BSJ5 609 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 TCHPQ9BT92 498 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 APOL6Q9BWW8 343 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 RSAD1Q9HA92 442 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 UBN1Q9NPG3 1134 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 TYW1Q9NV66 732 aaKnown RBP18.22■□□□□ 0.51
IRF1-211ENST00000613424 PCDHB13Q9Y5F0 798 aa18.22■□□□□ 0.51
IRF1-211ENST00000613424 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
IRF1-211ENST00000613424 KLRC4O43908 158 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 PRPF40AO75400 957 aaKnown RBP18.21■□□□□ 0.51
IRF1-211ENST00000613424 NR1I2O75469 434 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 TOM1L1O75674 476 aa18.21■□□□□ 0.51
IRF1-211ENST00000613424 MYL1P05976 194 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms