RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 DSG1Q02413 1049 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 KRT32Q14532 448 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 KIAA0319Q5VV43 1072 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 SRGAP1Q7Z6B7 1085 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 GLYCTKQ8IVS8 523 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 COLGALT2Q8IYK4 626 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 SUMF1Q8NBK3 374 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 CNNM3Q8NE01 707 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 ST13P5Q8NFI4 369 aaPredicted RBP19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 CNTNAP3BQ96NU0 1288 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 CNTNAP3Q9BZ76 1288 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 UBN1Q9NPG3 1134 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 ZDHHC7Q9NXF8 308 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 VPS54Q9P1Q0 977 aa19.25■□□□□ 0.67
CSNK1E-215ENST00000612795 COL4A3Q01955 1670 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 ANHXE9PGG2 379 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 GAS2O43903 313 aaKnown RBP19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 ERLIN2O94905 339 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 SRGAP2CP0DJJ0 459 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 MLH1P40692 756 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 PSMC5P62195 406 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 Q4G0T1 1027 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 UBXN11Q5T124 520 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 ANO5Q75V66 913 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 RNF168Q8IYW5 571 aaPredicted RBP19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 TBCKQ8TEA7 893 aa19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 PSPC1Q8WXF1 523 aaKnown RBP19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 SPATA6Q9NWH7 488 aaPredicted RBP19.24■□□□□ 0.67
CSNK1E-215ENST00000612795 NID2Q14112 1375 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 LAMTOR5O43504 91 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 TGM5O43548 720 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 EDIL3O43854 480 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 LRRN2O75325 713 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 TDP2O95551 362 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 HMGB1P09429 215 aaKnown RBP19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 GLULP15104 373 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 STARD6P59095 220 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 RASEFQ8IZ41 740 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 B3GALT6Q96L58 329 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 GAD1Q99259 594 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 BCO2Q9BYV7 579 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 C22orf23Q9BZE7 217 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 PRKD2Q9BZL6 878 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 MINDY3Q9H8M7 445 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 BMP2KQ9NSY1 1161 aaPredicted RBP19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 IPPQ9Y573 584 aa19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 ZFP37Q9Y6Q3 630 aaPredicted RBP19.23■□□□□ 0.67
CSNK1E-215ENST00000612795 TPRP12270 2363 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 ARL5CA6NH57 179 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 F8W810 466 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 SPTLC1O15269 473 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 KRT37O76014 449 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 SDHBP21912 280 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 FSHRP23945 695 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 HOXA11P31270 313 aaPredicted RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 SCNN1GP51170 649 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 NLRP5P59047 1200 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 VARS2Q5ST30 1063 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 B3GNT9Q6UX72 402 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 EXOC8Q8IYI6 725 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 SMG8Q8ND04 991 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 PRPF31Q8WWY3 499 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 SECISBP2LQ93073 1101 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 TMEM143Q96AN5 459 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 COLEC11Q9BWP8 271 aa19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 RNF26Q9BY78 433 aaPredicted RBP19.22■□□□□ 0.67
CSNK1E-215ENST00000612795 EPG5Q9HCE0 2579 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 KANSL1LA0AUZ9 987 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 PAPLNO95428 1278 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 C1RP00736 705 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 NPEPPSP55786 919 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 GPC5P78333 572 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 CREMQ03060 361 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 DSC1Q08554 894 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 LAMTOR4Q0VGL1 99 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 SNW1Q13573 536 aaKnown RBP19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 UBXN2BQ14CS0 331 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 USP41Q3LFD5 358 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 ZNF528Q3MIS6 628 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 TSGA10IPQ3SY00 556 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 FUT10Q6P4F1 479 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 Q6ZUG5 572 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 MAML2Q8IZL2 1156 aaPredicted RBP19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 BRF1Q92994 677 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 CEP170P1Q96L14 293 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 ZFP42Q96MM3 310 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 APOL6Q9BWW8 343 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 CHST7Q9NS84 486 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 FBXO4Q9UKT5 387 aa19.21■□□□□ 0.67
CSNK1E-215ENST00000612795 ZMYND10O75800 440 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 EFEMP2O95967 443 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 CPA1P15085 419 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 RFC5P40937 340 aa19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 QARSP47897 775 aaKnown RBP19.2■□□□□ 0.66
CSNK1E-215ENST00000612795 MLF2Q15773 248 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms