RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
LINC00547-201ENST00000612438 TMOD1P28289 359 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 PMS2P54278 862 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 PDE1BQ01064 536 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 ECM1Q16610 540 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 MUM1Q2TAK8 710 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 FAM26FQ5R3K3 315 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 TBC1D9BQ66K14 1250 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 POTEEQ6S8J3 1075 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 TTC30AQ86WT1 665 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 DDX42Q86XP3 938 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00547-201ENST00000612438 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 TGFBRAP1Q8WUH2 860 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 SPATA16Q9BXB7 569 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 ECT2Q9H8V3 914 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 SAMD15Q9P1V8 674 aa9.41□□□□□ -0.9
LINC00547-201ENST00000612438 LARSQ9P2J5 1176 aaKnown RBP9.41□□□□□ -0.9
LINC00547-201ENST00000612438 MAGEA13PA6NCF6 341 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 A8MUI8 341 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 WDR46O15213 610 aaKnown RBP9.4□□□□□ -0.9
LINC00547-201ENST00000612438 SART1O43290 800 aaKnown RBP9.4□□□□□ -0.9
LINC00547-201ENST00000612438 ZBTB48P10074 688 aaPredicted RBP9.4□□□□□ -0.9
LINC00547-201ENST00000612438 NFKBIAP25963 317 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 CTNNA1P35221 906 aaKnown RBP9.4□□□□□ -0.9
LINC00547-201ENST00000612438 PPP4CP60510 307 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 PPP2R2AP63151 447 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 LMNB2Q03252 620 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 AGBL2Q5U5Z8 902 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 IRF2BP2Q7Z5L9 587 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 DAAM2Q86T65 1068 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 LRRC57Q8N9N7 239 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 ATP8B4Q8TF62 1192 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 RAB17Q9H0T7 212 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 NEUROG2Q9H2A3 272 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 PRELID1Q9Y255 219 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 AFF2P51816 1311 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 BACH1O14867 736 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 ASAP2O43150 1006 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 ITGA2BP08514 1039 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 KRT16P08779 473 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 KCNA3P22001 575 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 NCALDP61601 193 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 WDR75Q8IWA0 830 aaKnown RBP9.4□□□□□ -0.9
LINC00547-201ENST00000612438 NEDD1Q8NHV4 660 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 EYA3Q99504 573 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 FGFBP2Q9BYJ0 223 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 RIOX1Q9H6W3 641 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 AGAP1Q9UPQ3 857 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 LRCH1Q9Y2L9 728 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 ZNF711Q9Y462 761 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 PCDHA2Q9Y5H9 948 aa9.4□□□□□ -0.9
LINC00547-201ENST00000612438 F8W031 263 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 GPSM2P81274 684 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 PTK2Q05397 1052 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 OLFML2BQ68BL8 750 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ZNF571Q7Z3V5 609 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ZC3H3Q8IXZ2 948 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 BHMT2Q9H2M3 363 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 RNPEPL1Q9HAU8 725 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ZNF287Q9HBT7 754 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 HESX1Q9UBX0 185 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 CNOT8Q9UFF9 292 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 SAP30BPQ9UHR5 308 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 FBXL5Q9UKA1 691 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 SKIP12755 728 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 PORP16435 677 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 TCF7P36402 384 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 CDK8P49336 464 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 PDE6CP51160 858 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ADARP55265 1226 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 DPY19L2P1Q6NXN4 242 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 NELFCDQ8IXH7 590 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 METTL13Q8N6R0 699 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ZNF713Q8N859 430 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 FAM136AQ96C01 138 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 RAB3IPQ96QF0 476 aaPredicted RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 AP1M1Q9BXS5 423 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 KCTD10Q9H3F6 313 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 SYNCQ9H7C4 482 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ETNK2Q9NVF9 386 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 DKK3Q9UBP4 350 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 CCDC188H7C350 402 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 RARAP10276 462 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 ADCY7P51828 1080 aa9.39□□□□□ -0.91
LINC00547-201ENST00000612438 GEMIN4P57678 1058 aaKnown RBP9.39□□□□□ -0.91
LINC00547-201ENST00000612438 KCNH2Q12809 1159 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms