RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
SREK1-216ENST00000612404 NOC4LQ9BVI4 516 aaKnown RBP19.17■□□□□ 0.66
SREK1-216ENST00000612404 ARMCX3Q9UH62 379 aaPredicted RBP19.17■□□□□ 0.66
SREK1-216ENST00000612404 A0A1B0GTH6 734 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 GOLGA8IPA6NC78 632 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 GOLGA8JA6NMD2 632 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 M0QZ92 97 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 ERLIN2O94905 339 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 SGPL1O95470 568 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 GARTP22102 1010 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 SLFN12LQ6IEE8 588 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 DRC7Q8IY82 874 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 ZSWIM2Q8NEG5 633 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 WNT8BQ93098 351 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 ACO2Q99798 780 aaKnown RBP19.16■□□□□ 0.66
SREK1-216ENST00000612404 HARSP12081 509 aaKnown RBP19.16■□□□□ 0.66
SREK1-216ENST00000612404 FGFR4P22455 802 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 MRPS6P82932 125 aaKnown RBP19.16■□□□□ 0.66
SREK1-216ENST00000612404 FRMD5Q7Z6J6 570 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 TMEM174Q8WUU8 243 aa19.16■□□□□ 0.66
SREK1-216ENST00000612404 ARVCFO00192 962 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 TULP1O00294 542 aaPredicted RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 CLDN3O15551 220 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 TOM1L1O75674 476 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 CTSHP09668 335 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 MAN2A1Q16706 1144 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 PTPN21Q16825 1174 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 FAM187BQ17R55 369 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 ATF7IP2Q5U623 682 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 ZBTB33Q86T24 672 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 ZNF710Q8N1W2 664 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 PRIMPOLQ96LW4 560 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 MKNK1Q9BUB5 465 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 MSTO1Q9BUK6 570 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 TRPV6Q9H1D0 765 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 RTN4Q9NQC3 1192 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 INTS13Q9NVM9 706 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 EIF4BP23588 611 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 THPOP40225 353 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 CRYBB1P53674 252 aaPredicted RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 CCDC173Q0VFZ6 552 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 NR1I3Q14994 352 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 AMHR2Q16671 573 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 TSHZ1Q6ZSZ6 1077 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 SLC43A3Q8NBI5 491 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 CELF4Q9BZC1 486 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 SENP6Q9GZR1 1112 aaPredicted RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 CRISPLD2Q9H0B8 497 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 METTL14Q9HCE5 456 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 AGO2Q9UKV8 859 aaKnown RBP19.15■□□□□ 0.66
SREK1-216ENST00000612404 CDY2AQ9Y6F7 541 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 STYXL1Q9Y6J8 313 aa19.15■□□□□ 0.66
SREK1-216ENST00000612404 TEX33O43247 280 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 RPLP2P05387 115 aaKnown RBP19.14■□□□□ 0.65
SREK1-216ENST00000612404 UBXN1Q04323 297 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 PTK7Q13308 1070 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 SNX17Q15036 470 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 SNRNP35Q16560 246 aaKnown RBP19.14■□□□□ 0.65
SREK1-216ENST00000612404 DCAF17Q5H9S7 520 aaPredicted RBP19.14■□□□□ 0.65
SREK1-216ENST00000612404 TCERG1LQ5VWI1 586 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 CATSPER4Q7RTX7 472 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 CDR2LQ86X02 465 aaPredicted RBP19.14■□□□□ 0.65
SREK1-216ENST00000612404 TRIM59Q8IWR1 403 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 SPC24Q8NBT2 197 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 TMEM40Q8WWA1 233 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 CPB2Q96IY4 423 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 FAM213AQ9BRX8 229 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 HAPLN2Q9GZV7 340 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.14■□□□□ 0.65
SREK1-216ENST00000612404 CNTNAP2Q9UHC6 1331 aa19.14■□□□□ 0.65
SREK1-216ENST00000612404 LGALS16A8MUM7 142 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 B4GALT4O60513 344 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 VWA3BQ502W6 1294 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 MIIPQ5JXC2 388 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 CBWD2Q8IUF1 395 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 GPD1LQ8N335 351 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 TRPV2Q9Y5S1 764 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 A0A0B4J269 797 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 TSPAN1O60635 241 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 ARF4P18085 180 aaPredicted RBP19.13■□□□□ 0.65
SREK1-216ENST00000612404 SFPQP23246 707 aaKnown RBP eCLIP19.13■□□□□ 0.65
SREK1-216ENST00000612404 NCBP1Q09161 790 aaKnown RBP19.13■□□□□ 0.65
SREK1-216ENST00000612404 ZNF568Q3ZCX4 644 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.13■□□□□ 0.65
SREK1-216ENST00000612404 NDST4Q9H3R1 872 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 TNFSF13BQ9Y275 285 aa19.13■□□□□ 0.65
SREK1-216ENST00000612404 KIAA0391O15091 583 aaKnown RBP19.12■□□□□ 0.65
SREK1-216ENST00000612404 EXTL3O43909 919 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 KRT13P13646 458 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 CDC25BP30305 580 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 NOLC1Q14978 699 aaKnown RBP eCLIP19.12■□□□□ 0.65
SREK1-216ENST00000612404 EEF1DP3Q658K8 133 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 MPZL3Q6UWV2 235 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 RPAINQ86UA6 219 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 DHX38Q92620 1227 aaKnown RBP19.12■□□□□ 0.65
SREK1-216ENST00000612404 BORCS6Q96GS4 357 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 PDLIM2Q96JY6 352 aa19.12■□□□□ 0.65
SREK1-216ENST00000612404 KIAA0100Q14667 2235 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms