RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CETN1Q12798 172 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 MTM1Q13496 603 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 BMT2Q1RMZ1 405 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-207ENST00000612273 CEP89Q96ST8 783 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 EPB41L4BQ9H329 900 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 ZDHHC18Q9NUE0 388 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 RASAL2Q9UJF2 1139 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 COL5A3P25940 1745 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-207ENST00000612273 CCDC172P0C7W6 258 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 MAP2K2P36507 400 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 GPC5P78333 572 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 BYSLQ13895 437 aaKnown RBP15.12■□□□□ 0.01
COL6A1-207ENST00000612273 ANKRD20A8PQ5CZ79 823 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 FAM182AQ5T1J6 154 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 STXBP4Q6ZWJ1 553 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 HOOK3Q86VS8 718 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 TAB3Q8N5C8 712 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-207ENST00000612273 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-207ENST00000612273 RARAP10276 462 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 NF2P35240 595 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 CYB5D1Q6P9G0 228 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 CCDC50Q8IVM0 306 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 TATDN2Q93075 761 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 MAST2Q6P0Q8 1798 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 NFIBO00712 420 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 CES2O00748 559 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 RASGRF2O14827 1237 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 RGL2O15211 777 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 ALAS1P13196 640 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 ITGB5P18084 799 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 DRD4P21917 467 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 MOXD1Q6UVY6 613 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 C6orf89Q6UWU4 347 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 SUGP1Q8IWZ8 645 aaKnown RBP15.11■□□□□ 0.01
COL6A1-207ENST00000612273 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-207ENST00000612273 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-207ENST00000612273 TEKT3Q9BXF9 490 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 KLHL11Q9NVR0 708 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 HSPBP1Q9NZL4 362 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 LARSQ9P2J5 1176 aaKnown RBP15.11■□□□□ 0.01
COL6A1-207ENST00000612273 MTRF1LQ9UGC7 380 aaKnown RBP15.11■□□□□ 0.01
COL6A1-207ENST00000612273 RPTORQ8N122 1335 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 PPFIA2O75334 1257 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 CIITAP33076 1130 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 AGBL2Q5U5Z8 902 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 LDHDQ86WU2 507 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 CCDC197Q8NCU1 140 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 ZSWIM1Q9BR11 485 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 GRHL1Q9NZI5 618 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 NENFQ9UMX5 172 aa15.11■□□□□ 0.01
COL6A1-207ENST00000612273 CALCOCO2Q13137 446 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 DACT2Q5SW24 774 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 KIF2BQ8N4N8 673 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 SEMA4DQ92854 862 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 KCNH7Q9NS40 1196 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 KYNUQ16719 465 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 HAUS6Q7Z4H7 955 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 PODNQ7Z5L7 613 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 FUKQ8N0W3 1084 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 CPA5Q8WXQ8 436 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 ZKSCAN4Q969J2 545 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-207ENST00000612273 ZHX2Q9Y6X8 837 aa15.1■□□□□ 0.01
COL6A1-207ENST00000612273 GTPBP10A4D1E9 387 aaKnown RBP15.09■□□□□ 0.01
COL6A1-207ENST00000612273 EIF3DO15371 548 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL6A1-207ENST00000612273 PHF2O75151 1096 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 GJB6O95452 261 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ADRB2P07550 413 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 NPR1P16066 1061 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ADRA2BP18089 450 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 SPATS2Q86XZ4 545 aaKnown RBP15.09■□□□□ 0.01
COL6A1-207ENST00000612273 KREMEN1Q96MU8 473 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TMEM39BQ9GZU3 492 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TMEM117Q9H0C3 514 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TUFT1Q9NNX1 390 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 CHST7Q9NS84 486 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ABCF3Q9NUQ8 709 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 FGFR1OP2Q9NVK5 253 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 SAMD15Q9P1V8 674 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 INTUQ9ULD6 942 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 CCPG1Q9ULG6 757 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 STK38LQ9Y2H1 464 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ADAMTSL1Q8N6G6 1762 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 EIF4E1BA6NMX2 242 aaKnown RBP15.09■□□□□ 0.01
COL6A1-207ENST00000612273 O00370 1275 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 SGO2Q562F6 1265 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 COL23A1Q86Y22 540 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-207ENST00000612273 LMO3Q8TAP4 145 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 EPS8L1Q8TE68 723 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 GMCL1Q96IK5 515 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ARHGEF10LQ9HCE6 1279 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 COL20A1Q9P218 1284 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
COL6A1-207ENST00000612273 TESPA1A2RU30 521 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms