RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 PCDHA13Q9Y5I0 950 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 LGALS16A8MUM7 142 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 SGK1O00141 431 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 ARF4P18085 180 aaPredicted RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 IFNAR2P48551 515 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 ALDH18A1P54886 795 aaKnown RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 NFX1Q12986 1120 aaKnown RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 DYDC2Q96IM9 177 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 CCDC188H7C350 402 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 SUN1O94901 812 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 ITGADQ13349 1161 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 CCDC144BQ3MJ40 725 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 C12orf60Q5U649 245 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 PROM2Q8N271 834 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 VPS37AQ8NEZ2 397 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 TEX12Q9BXU0 123 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 TRPC4Q9UBN4 977 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 TEX33O43247 280 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 RINT1Q6NUQ1 792 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 COMMD2Q86X83 199 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 A0A087X0T9 212 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 IL9RQ01113 521 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 CYP4F22Q6NT55 531 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 PPP1R18Q6NYC8 613 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 GCLMP48507 274 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 STXBP2Q15833 593 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 TIGD7Q6NT04 549 aaPredicted RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 RFX6Q8HWS3 928 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 RHOT2Q8IXI1 618 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 ABI2Q9NYB9 513 aaPredicted RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SCOCQ9UIL1 159 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SPEF1Q9Y4P9 236 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 DNAJC6O75061 913 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 DARSP14868 501 aaKnown RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SGO2Q562F6 1265 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 ALS2CLQ60I27 953 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 LRRC8CQ8TDW0 803 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 MSTO1Q9BUK6 570 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 CALN1Q9BXU9 219 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 USP42Q9H9J4 1324 aaKnown RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 DENND3A2RUS2 1198 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SRGAP2O75044 1071 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 EEF1B2P24534 225 aaKnown RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 RWDD4Q6NW29 188 aaKnown RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 NDUFAF2Q8N183 169 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 PARVBQ9HBI1 364 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 FAN1Q9Y2M0 1017 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 EVI5O60447 810 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 FCER1AP12319 257 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 YWHAGP61981 247 aaKnown RBP eCLIP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 MPP4Q96JB8 637 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 RNF146Q9NTX7 359 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 TRIM64BA6NI03 449 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 A6NJR5 290 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SLC16A4O15374 487 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 ANP32DO95626 131 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SLC8A1P32418 973 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 CCT5P48643 541 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 RRM2BQ7LG56 351 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 GLYCTKQ8IVS8 523 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 TTC13Q8NBP0 860 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 CCDC197Q8NCU1 140 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 DACH2Q96NX9 599 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
SRGAP2B-204ENST00000612199 PNPLA7Q6ZV29 1317 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 OTOL1A6NHN0 477 aaPredicted RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 CSF1RP07333 972 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 DDX5P17844 614 aaKnown RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 HOXD10P28358 340 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 EIF3BP55884 814 aaKnown RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 SLC27A3Q5K4L6 730 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 SNX25Q9H3E2 840 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 DNAJC17Q9NVM6 304 aaKnown RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 TSC22D2O75157 780 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 LBRQ14739 615 aaKnown RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 CASP8Q14790 479 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 IGDCC4Q8TDY8 1250 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 CNOT10Q9H9A5 744 aaKnown RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 SLCO1A2P46721 670 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 COASYQ13057 564 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 ANKS6Q68DC2 871 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 PALB2Q86YC2 1186 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 RAD54LQ92698 747 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 RUVBL2Q9Y230 463 aaKnown RBP10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 NEXMIFQ5QGS0 1516 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 AKAP5P24588 427 aa10.05□□□□□ -0.8
SRGAP2B-204ENST00000612199 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms