RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
TCF3-220ENST00000611869 TRIM50Q86XT4 487 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 C1orf54Q8WWF1 131 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 MRPL4Q9BYD3 311 aaKnown RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 FOXN3O00409 490 aaPredicted RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 MEIS2O14770 477 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 CARSP49589 748 aaKnown RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 BASP1P80723 227 aaKnown RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 CATSPER4Q7RTX7 472 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 CBWD2Q8IUF1 395 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 HACE1Q8IYU2 909 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 TIPINQ9BVW5 301 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 PNMA3Q9UL41 463 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 HMGB1P1B2RPK0 211 aaPredicted RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 SCP2P22307 547 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 PHBP35232 272 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 EMC2Q15006 297 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 CCDC137Q6PK04 289 aaKnown RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 DDX42Q86XP3 938 aaKnown RBP eCLIP14.07□□□□□ -0.16
TCF3-220ENST00000611869 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 KCTD6Q8NC69 237 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 SYTL5Q8TDW5 730 aaPredicted RBP14.07□□□□□ -0.16
TCF3-220ENST00000611869 MAD1L1Q9Y6D9 718 aa14.07□□□□□ -0.16
TCF3-220ENST00000611869 ADAMTS3O15072 1205 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 RTN2O75298 545 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 SLITRK3O94933 977 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 KCTD17Q8N5Z5 321 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 CPA5Q8WXQ8 436 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 MKL1Q969V6 931 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 MMP19Q99542 508 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TRIM51Q9BSJ1 452 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 FBXL5Q9UKA1 691 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 BCL9LQ86UU0 1499 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 CIITAP33076 1130 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 KCNA1Q09470 495 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TTLL4Q14679 1199 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 NPY5RQ15761 445 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 LGSNQ5TDP6 509 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 PPP1R2P3Q6NXS1 205 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 OTOP1Q7RTM1 612 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 SMC6Q96SB8 1091 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TARS2Q9BW92 718 aaKnown RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 SEPT10Q9P0V9 454 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TTC7AQ9ULT0 858 aaPredicted RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 CD2APQ9Y5K6 639 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 PFASO15067 1338 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TXNP10599 105 aaKnown RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 RPS12P25398 132 aaKnown RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 NME8Q8N427 588 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 SH2D3CQ8N5H7 860 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 A6NJR5 290 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 NDC80O14777 642 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 RAD51CO43502 376 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 GPC3P51654 580 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 CASP5P51878 434 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 BACE1P56817 501 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 TMED2Q15363 201 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 FAM83AQ86UY5 434 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 ZNF526Q8TF50 670 aaPredicted RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 MTMR8Q96EF0 704 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
TCF3-220ENST00000611869 SLITRK6Q9H5Y7 841 aa14.06□□□□□ -0.16
TCF3-220ENST00000611869 PLA2G4AP47712 749 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 CDK17Q00537 523 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 ENOSF1Q7L5Y1 443 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 ZNF571Q7Z3V5 609 aaPredicted RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 FUT8Q9BYC5 575 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 ANKEF1Q9NU02 776 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 DMGDHQ9UI17 866 aaKnown RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 ABCC6O95255 1503 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 MCF2LO15068 1137 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 TBXAS1P24557 533 aaPredicted RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 ZNF131P52739 623 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 EIF3BP55884 814 aaKnown RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 ACTR2P61160 394 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 GABPAQ06546 454 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 MYO1EQ12965 1108 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 PCSK1NQ9UHG2 260 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 TBX20Q9UMR3 447 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 ALG6Q9Y672 507 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 RNF225M0QZC1 329 aaPredicted RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 ANXA13P27216 316 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 PHKA2P46019 1235 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 GTF2A1P52655 376 aaPredicted RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 SOX10P56693 466 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 DUOXA2Q1HG44 320 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 BEND6Q5SZJ8 279 aaPredicted RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 PAPD7Q5XG87 772 aaKnown RBP14.05□□□□□ -0.16
TCF3-220ENST00000611869 GPATCH11Q8N954 259 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 OR6B3Q8NGW1 331 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 HSPH1Q92598 858 aa14.05□□□□□ -0.16
TCF3-220ENST00000611869 RPS6KC1Q96S38 1066 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms