RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CNOT10Q9H9A5 744 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 SLC9A2Q9UBY0 812 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 SALL4Q9UJQ4 1053 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 WNT10BO00744 389 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 EIF3HO15372 352 aaKnown RBP eCLIP6.84□□□□□ -1.31
SNX13-213ENST00000611725 RPS6KA5O75582 802 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 NOL4O94818 638 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 COMTP21964 271 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 DHX34Q14147 1143 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 SAMD7Q7Z3H4 446 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 GPD1LQ8N335 351 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CCDC89Q8N998 374 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 IPO4Q8TEX9 1081 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 GPRASP2Q96D09 838 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 ERP44Q9BS26 406 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 NUP85Q9BW27 656 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 KIAA1683Q9H0B3 1180 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 LDHAP00338 332 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 STX2P32856 288 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 YWHAEP62258 255 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 FAM160B1Q5W0V3 765 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CCDC137Q6PK04 289 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 IRF2BP2Q7Z5L9 587 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 C4orf19Q8IY42 314 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CASKIN2Q8WXE0 1202 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 VPS37BQ9H9H4 285 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 SCINQ9Y6U3 715 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 TRIM66O15016 1216 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CLDN3O15551 220 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CD58P19256 250 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 MAGOHP61326 146 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 SPIRE1Q08AE8 756 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 PPP2R5CQ13362 524 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 SNX1Q13596 522 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 TRIP13Q15645 432 aaPredicted RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 CYP4F22Q6NT55 531 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 SV2AQ7L0J3 742 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 CEP57Q86XR8 500 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 TMEM35BQ8NCS4 154 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 RDM1Q8NG50 284 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 FBXO25Q8TCJ0 367 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 MRRFQ96E11 262 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 HEMGNQ9BXL5 484 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 MOV10L1Q9BXT6 1211 aaKnown RBP6.84□□□□□ -1.31
SNX13-213ENST00000611725 MYOZ2Q9NPC6 264 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 AGTPBP1Q9UPW5 1226 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 IVNS1ABPQ9Y6Y0 642 aa6.84□□□□□ -1.31
SNX13-213ENST00000611725 A0A0A6YYK5 440 aaPredicted RBP6.84□□□□□ -1.32
SNX13-213ENST00000611725 NPTX2P47972 431 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 MMP14P50281 582 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 BYSLQ13895 437 aaKnown RBP6.84□□□□□ -1.32
SNX13-213ENST00000611725 ASTE1Q2TB18 679 aaPredicted RBP6.84□□□□□ -1.32
SNX13-213ENST00000611725 DNAJC24Q6P3W2 148 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 PROCA1Q8NCQ7 364 aaPredicted RBP6.84□□□□□ -1.32
SNX13-213ENST00000611725 ZSWIM1Q9BR11 485 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 KIFC3Q9BVG8 833 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 POLR3FQ9H1D9 316 aaPredicted RBP6.84□□□□□ -1.32
SNX13-213ENST00000611725 C17orf75Q9HAS0 396 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 TMEM51Q9NW97 253 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 PCDHB2Q9Y5E7 798 aa6.84□□□□□ -1.32
SNX13-213ENST00000611725 IGLV3-22A0A075B6J6 115 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 FRMD3A2A2Y4 597 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 RBAK-RBAKDNI3L0D1 243 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 RTN2O75298 545 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 LCA5LO95447 670 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 ALDH3A1P30838 453 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SEC24CP53992 1094 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SNRPFP62306 86 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 CBWD6Q4V339 395 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 CBWD3Q5JTY5 395 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 CBWD5Q5RIA9 395 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 TADA2BQ86TJ2 420 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 CAVIN3Q969G5 261 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 NXF1Q9UBU9 619 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 GOLGA8SH3BPF8 625 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 TNNC2P02585 160 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 VIL1P09327 827 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 ATP2A2P16615 1042 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 ZNF394Q53GI3 561 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 ZNF280CQ8ND82 737 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SLC20A1Q8WUM9 679 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 HVCN1Q96D96 273 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 IKZF4Q9H2S9 585 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 AGO2Q9UKV8 859 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 CD2APQ9Y5K6 639 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 TISP43B9A030 160 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 KIAA0391O15091 583 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 RNF8O76064 485 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 ACSL3O95573 720 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SCP2P22307 547 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 COPB2P35606 906 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 NEDD9Q14511 834 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SETDB1Q15047 1291 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 EPC2Q52LR7 807 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 PRAMEF18Q5VWM3 479 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 IL31RAQ8NI17 732 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms