RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ALCAMQ13740 583 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 UBXN11Q5T124 520 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 NT5DC1Q5TFE4 455 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 ZPBP2Q6X784 338 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 ZNF598Q86UK7 904 aaKnown RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 CCDC47Q96A33 483 aaKnown RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 FIZ1Q96SL8 496 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 BLZF1Q9H2G9 400 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 TNFSF13BQ9Y275 285 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 PRPF40AO75400 957 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 GCNT3O95395 438 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 CA3P07451 260 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 MYOGP15173 224 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 FXR1P51114 621 aaKnown RBP eCLIP15.65■□□□□ 0.1
CTSA-219ENST00000607841 COASYQ13057 564 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 SNW1Q13573 536 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 BTG3Q14201 252 aaPredicted RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 DCAF4L1Q3SXM0 396 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 PPP2R2DQ66LE6 453 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 GRAMD1CQ8IYS0 662 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 CMTR2Q8IYT2 770 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 ENGASEQ8NFI3 743 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 ZNF689Q96CS4 500 aaPredicted RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 BICD1Q96G01 975 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 LRCH3Q96II8 777 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 TIGD1Q96MW7 591 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 ACO2Q99798 780 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 TARS2Q9BW92 718 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 EIF2AQ9BY44 585 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 TMEM117Q9H0C3 514 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 PDZD7Q9H5P4 517 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 TBC1D7Q9P0N9 293 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 EXOC7Q9UPT5 735 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 YBX2Q9Y2T7 364 aaKnown RBP15.65■□□□□ 0.1
CTSA-219ENST00000607841 IPPQ9Y573 584 aa15.65■□□□□ 0.1
CTSA-219ENST00000607841 TTLL13PA6NNM8 815 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
CTSA-219ENST00000607841 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.09
CTSA-219ENST00000607841 TOM1L1O75674 476 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 NPTXRO95502 500 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 FGFR1P11362 822 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 ITGA4P13612 1032 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 LIG4P49917 911 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 ZNF697Q5TEC3 545 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 GLB1LQ6UWU2 654 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 CDR2LQ86X02 465 aaPredicted RBP15.64■□□□□ 0.09
CTSA-219ENST00000607841 FIBCD1Q8N539 461 aa15.64■□□□□ 0.09
CTSA-219ENST00000607841 TBKBP1A7MCY6 615 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 CLDN3O15551 220 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 EDN1P05305 212 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 ATF7P17544 494 aaPredicted RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 CASP1P29466 404 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 PSMD2Q13200 908 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 ZNF568Q3ZCX4 644 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 ZC2HC1CQ53FD0 456 aaPredicted RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 FAM26FQ5R3K3 315 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 MPZL3Q6UWV2 235 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 MAP4K3Q8IVH8 894 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 ELOA2Q8IYF1 753 aaPredicted RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 SMG8Q8ND04 991 aaKnown RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 ACCSQ96QU6 501 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 MRPL9Q9BYD2 267 aaKnown RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 TMEM206Q9H813 350 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 RSAD1Q9HA92 442 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 RC3H2Q9HBD1 1191 aaKnown RBP15.63■□□□□ 0.09
CTSA-219ENST00000607841 PTPRHQ9HD43 1115 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 EXOC1Q9NV70 894 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 USP20Q9Y2K6 914 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 GIT1Q9Y2X7 761 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 RWDD3Q9Y3V2 267 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
CTSA-219ENST00000607841 LCHNA4D1U4 455 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 LINC01553A4QN01 128 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 NR1I2O75469 434 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 PPP1R37O75864 691 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 PIGRP01833 764 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 RPN1P04843 607 aaKnown RBP15.62■□□□□ 0.09
CTSA-219ENST00000607841 MCF2P10911 925 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 PROZP22891 400 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.09
CTSA-219ENST00000607841 POSTNQ15063 836 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 PAN2Q504Q3 1202 aaKnown RBP15.62■□□□□ 0.09
CTSA-219ENST00000607841 L1TD1Q5T7N2 865 aaKnown RBP15.62■□□□□ 0.09
CTSA-219ENST00000607841 EEF1DP3Q658K8 133 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 SLFN12LQ6IEE8 588 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 URGCPQ8TCY9 931 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 HELQQ8TDG4 1101 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 LPPQ93052 612 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 SAMD11Q96NU1 681 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 STRA6Q9BX79 667 aa15.62■□□□□ 0.09
CTSA-219ENST00000607841 NXF3Q9H4D5 531 aaKnown RBP15.62■□□□□ 0.09
CTSA-219ENST00000607841 ZNF576Q9H609 170 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms