RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MAN1C1Q9NR34 630 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 GJB4Q9NTQ9 266 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 USTQ9Y2C2 406 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 SSX2IPQ9Y2D8 614 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 C2orf16Q68DN1 1984 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 DENND4AQ7Z401 1863 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 STK25O00506 426 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 ADH1AP07327 375 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
CTSA-216ENST00000607212 GBP2P32456 591 aaPredicted RBP16.55■□□□□ 0.24
CTSA-216ENST00000607212 MLH1P40692 756 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 CLCN4P51793 760 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 AFF1P51825 1210 aaKnown RBP16.55■□□□□ 0.24
CTSA-216ENST00000607212 MXD4Q14582 209 aaPredicted RBP16.55■□□□□ 0.24
CTSA-216ENST00000607212 UBXN11Q5T124 520 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
CTSA-216ENST00000607212 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 HAS1Q92839 578 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 GAD1Q99259 594 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 HERC2P3Q9BVR0 1158 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 EIF2AQ9BY44 585 aaKnown RBP16.55■□□□□ 0.24
CTSA-216ENST00000607212 IPPQ9Y573 584 aa16.55■□□□□ 0.24
CTSA-216ENST00000607212 TRIOO75962 3097 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 ZBTB39O15060 712 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 GLUD1P00367 558 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 SOD2P04179 222 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 AXLP30530 894 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 HOXA11P31270 313 aaPredicted RBP16.54■□□□□ 0.24
CTSA-216ENST00000607212 GLUD2P49448 558 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 SCNN1GP51170 649 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 NUBP1P53384 320 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 CALCRLQ16602 461 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 TMEM105Q8N8V8 129 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 EIF2AK1Q9BQI3 630 aaKnown RBP16.54■□□□□ 0.24
CTSA-216ENST00000607212 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 DPP7Q9UHL4 492 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 HES2Q9Y543 173 aa16.54■□□□□ 0.24
CTSA-216ENST00000607212 PLXNA3P51805 1871 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 TSPAN1O60635 241 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 PFKFB2O60825 505 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 NR5A1Q13285 461 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 TDGQ13569 410 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 TRIM29Q14134 588 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 GLYCTKQ8IVS8 523 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 SMG8Q8ND04 991 aaKnown RBP16.53■□□□□ 0.24
CTSA-216ENST00000607212 FEZF2Q8TBJ5 459 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 STAMQ92783 540 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 CCDC51Q96ER9 411 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 RPS6KC1Q96S38 1066 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 COLEC11Q9BWP8 271 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 PARP2Q9UGN5 583 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 TPCN1Q9ULQ1 816 aa16.53■□□□□ 0.24
CTSA-216ENST00000607212 WDFY4Q6ZS81 3184 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 CCDC195A0A1B0GUA6 201 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 ARL5CA6NH57 179 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 INPPL1O15357 1258 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 NPTXRO95502 500 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 SPATA31D3P0C874 917 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 PTENP60484 403 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 ANKRD1Q15327 319 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 PCBP1Q15365 356 aaKnown RBP eCLIP16.52■□□□□ 0.24
CTSA-216ENST00000607212 SPATA31D4Q6ZUB0 917 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 MAEAQ7L5Y9 396 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 TAS1R1Q7RTX1 841 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 PALB2Q86YC2 1186 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 COLGALT2Q8IYK4 626 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 ZFP42Q96MM3 310 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 CSRNP2Q9H175 543 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 POLR3FQ9H1D9 316 aaPredicted RBP16.52■□□□□ 0.24
CTSA-216ENST00000607212 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 MARCH5Q9NX47 278 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 PCDHA12Q9UN75 941 aa16.52■□□□□ 0.24
CTSA-216ENST00000607212 TEX28O15482 410 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 USO1O60763 962 aaKnown RBP16.51■□□□□ 0.23
CTSA-216ENST00000607212 DGAT1O75907 488 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 SLITRK3O94933 977 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 AKAP5P24588 427 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 TXKP42681 527 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 EARS2Q5JPH6 523 aaKnown RBP16.51■□□□□ 0.23
CTSA-216ENST00000607212 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
CTSA-216ENST00000607212 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 ASAP3Q8TDY4 903 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 SMG7Q92540 1137 aaKnown RBP16.51■□□□□ 0.23
CTSA-216ENST00000607212 KCNK12Q9HB15 430 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 KLK14Q9P0G3 267 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 GIT1Q9Y2X7 761 aa16.51■□□□□ 0.23
CTSA-216ENST00000607212 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 NEMFO60524 1076 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 LIG1P18858 919 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 CLCN5P51795 746 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 MBTD1Q05BQ5 628 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 CAPSQ13938 189 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 SIX5Q8N196 739 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 PIGOQ8TEQ8 1089 aa16.5■□□□□ 0.23
CTSA-216ENST00000607212 RABGGTAQ92696 567 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms