RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 HARSP12081 509 aaKnown RBP8.42□□□□□ -1.06
MSH6-211ENST00000606499 HOXA11P31270 313 aaPredicted RBP8.42□□□□□ -1.06
MSH6-211ENST00000606499 ABCD1P33897 745 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 RFC2P35250 354 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 LIG4P49917 911 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 EPHB4P54760 987 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 FPGSQ05932 587 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 STX1AQ16623 288 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 KNOP1Q1ED39 458 aaKnown RBP8.42□□□□□ -1.06
MSH6-211ENST00000606499 ZNF568Q3ZCX4 644 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 COBLL1Q53SF7 1204 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 ZPBP2Q6X784 338 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 ZBTB33Q86T24 672 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 TMEM199Q8N511 208 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 DBF4BQ8NFT6 615 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 SEPT8Q92599 483 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 ZBTB45Q96K62 511 aaPredicted RBP8.42□□□□□ -1.06
MSH6-211ENST00000606499 FUCA2Q9BTY2 467 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 GTPBP4Q9BZE4 634 aaKnown RBP8.42□□□□□ -1.06
MSH6-211ENST00000606499 DNAJC25Q9H1X3 360 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 SEMA6BQ9H3T3 888 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 TMEM206Q9H813 350 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 ANK1P16157 1881 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 CHD7Q9P2D1 2997 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 CEP290O15078 2479 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 PDCD11Q14690 1871 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 COL4A6Q14031 1691 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 A0A1B0GUA9 196 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 ABLIM1O14639 778 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 PSMA7O14818 248 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 N4BP3O15049 544 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 CLIC2O15247 247 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 TOM1L1O75674 476 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 KIF20AO95235 890 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 PARNO95453 639 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 NPTXRO95502 500 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 IBSPP21815 317 aaPredicted RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 PROZP22891 400 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 ADSSP30520 456 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 AXLP30530 894 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 MATR3P43243 847 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSH6-211ENST00000606499 PMS1P54277 932 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 STX17P56962 302 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 NCBP1Q09161 790 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 STIM1Q13586 685 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 DSC3Q14574 896 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 NOLC1Q14978 699 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSH6-211ENST00000606499 PCBP1Q15365 356 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSH6-211ENST00000606499 ANO6Q4KMQ2 910 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 ZCWPW2Q504Y3 356 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 SEZ6Q53EL9 994 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 UBXN11Q5T124 520 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 TWF2Q6IBS0 349 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 NOTUMQ6P988 496 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 CNKSR3Q6P9H4 555 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 SLC27A1Q6PCB7 646 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 MPZL3Q6UWV2 235 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 C16orf59Q7L2K0 433 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 CEP120Q8N960 986 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 ZSWIM2Q8NEG5 633 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 NELFBQ8WX92 580 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 P2RX5Q93086 422 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 EEF2KMTQ96G04 330 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 MED15Q96RN5 788 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 ADAM2Q99965 735 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 CBWD1Q9BRT8 395 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 EIF2AQ9BY44 585 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 GBP3Q9H0R5 595 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 CDT1Q9H211 546 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 PCIF1Q9H4Z3 704 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 PTPRHQ9HD43 1115 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 IL23AQ9NPF7 189 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 AGPAT3Q9NRZ7 376 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 TYW1Q9NV66 732 aaKnown RBP8.41□□□□□ -1.06
MSH6-211ENST00000606499 ANO10Q9NW15 660 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 EXOC7Q9UPT5 735 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 TNFSF13BQ9Y275 285 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 NR2E3Q9Y5X4 410 aa8.41□□□□□ -1.06
MSH6-211ENST00000606499 GBF1Q92538 1859 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 LAMA3Q16787 3333 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 A0A0B4J269 797 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 PDXKO00764 312 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 CLDN3O15551 220 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 FAM189A1O60320 539 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 CCDC192P0DO97 292 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 CCNE1P24864 410 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 PPP1R2P41236 205 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 MAGEA10P43363 369 aaPredicted RBP8.4□□□□□ -1.06
MSH6-211ENST00000606499 RGS19P49795 217 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 CYP2J2P51589 502 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 MCL1Q07820 350 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 PAK1Q13153 545 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 PPIGQ13427 754 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSH6-211ENST00000606499 ZBTB41Q5SVQ8 909 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 ANKRD40Q6AI12 368 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 CENPPQ6IPU0 288 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 TTI2Q6NXR4 508 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 ARMCX5Q6P1M9 558 aa8.4□□□□□ -1.06
MSH6-211ENST00000606499 HS2ST1Q7LGA3 356 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms