RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 SRGAP1Q7Z6B7 1085 aa20.23■□□□□ 0.83
CCDC12-213ENST00000605875 MRPL10Q7Z7H8 261 aaKnown RBP20.23■□□□□ 0.83
CCDC12-213ENST00000605875 TPH2Q8IWU9 490 aa20.23■□□□□ 0.83
CCDC12-213ENST00000605875 PRPF31Q8WWY3 499 aaKnown RBP20.23■□□□□ 0.83
CCDC12-213ENST00000605875 PSPC1Q8WXF1 523 aaKnown RBP20.23■□□□□ 0.83
CCDC12-213ENST00000605875 TMEM143Q96AN5 459 aa20.23■□□□□ 0.83
CCDC12-213ENST00000605875 FAM193BQ96PV7 902 aaPredicted RBP20.23■□□□□ 0.83
CCDC12-213ENST00000605875 FOXP1Q9H334 677 aaPredicted RBP20.23■□□□□ 0.83
CCDC12-213ENST00000605875 DHX33Q9H6R0 707 aaKnown RBP20.23■□□□□ 0.83
CCDC12-213ENST00000605875 USTQ9Y2C2 406 aa20.23■□□□□ 0.83
CCDC12-213ENST00000605875 ZBTB39O15060 712 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 GALR2O43603 387 aaPredicted RBP20.22■□□□□ 0.83
CCDC12-213ENST00000605875 GFRA3O60609 400 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 ALDH2P05091 517 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 SSBP05455 408 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC12-213ENST00000605875 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 FEZF2Q8TBJ5 459 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 KLHL5Q96PQ7 755 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 EMILIN2Q9BXX0 1053 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 MINDY3Q9H8M7 445 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 SFXN1Q9H9B4 322 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 RSAD1Q9HA92 442 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 KANSL3Q9P2N6 904 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 STK39Q9UEW8 545 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 FAN1Q9Y2M0 1017 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 PPME1Q9Y570 386 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 CNTNAP2Q9UHC6 1331 aa20.22■□□□□ 0.83
CCDC12-213ENST00000605875 SLITRK3O94933 977 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 KLRC2P26717 231 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 HOXA11P31270 313 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-213ENST00000605875 AFF1P51825 1210 aaKnown RBP20.21■□□□□ 0.83
CCDC12-213ENST00000605875 LAMTOR4Q0VGL1 99 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 NBR1Q14596 966 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 ZNF174Q15697 407 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 TTC38Q5R3I4 469 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 OTUD6AQ7L8S5 288 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 TMEM105Q8N8V8 129 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 TBC1D32Q96NH3 1257 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 TMEM175Q9BSA9 504 aa20.21■□□□□ 0.83
CCDC12-213ENST00000605875 DENND4AQ7Z401 1863 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 POMCP01189 267 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 CNPP09543 421 aaKnown RBP20.2■□□□□ 0.82
CCDC12-213ENST00000605875 OR52Z1P0C646 297 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 CLCN4P51793 760 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 UBXN11Q5T124 520 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 GPR149Q86SP6 731 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 TCP11Q8WWU5 503 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 ACSF2Q96CM8 615 aaPredicted RBP20.2■□□□□ 0.82
CCDC12-213ENST00000605875 TMX3Q96JJ7 454 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 CCDC43Q96MW1 224 aaKnown RBP20.2■□□□□ 0.82
CCDC12-213ENST00000605875 MTRQ99707 1265 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 HSD17B14Q9BPX1 270 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
CCDC12-213ENST00000605875 CACNA1HO95180 2353 aa20.2■□□□□ 0.82
CCDC12-213ENST00000605875 NRP1O14786 923 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 ASAP2O43150 1006 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 LILRB3O75022 631 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 LYPLA2O95372 231 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
CCDC12-213ENST00000605875 ASTLQ6HA08 431 aaPredicted RBP20.19■□□□□ 0.82
CCDC12-213ENST00000605875 CCDC149Q6ZUS6 474 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 RNF149Q8NC42 400 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 MFSD1Q9H3U5 465 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 XPNPEP1Q9NQW7 623 aa20.19■□□□□ 0.82
CCDC12-213ENST00000605875 NOL7Q9UMY1 257 aaKnown RBP20.19■□□□□ 0.82
CCDC12-213ENST00000605875 PLXNA3P51805 1871 aa20.18■□□□□ 0.82
CCDC12-213ENST00000605875 GAS2O43903 313 aaKnown RBP20.18■□□□□ 0.82
CCDC12-213ENST00000605875 ITGA4P13612 1032 aa20.18■□□□□ 0.82
CCDC12-213ENST00000605875 ORC2Q13416 577 aaPredicted RBP20.18■□□□□ 0.82
CCDC12-213ENST00000605875 OTOP3Q7RTS5 596 aa20.18■□□□□ 0.82
CCDC12-213ENST00000605875 FERMT3Q86UX7 667 aa20.18■□□□□ 0.82
CCDC12-213ENST00000605875 CNNM3Q8NE01 707 aa20.18■□□□□ 0.82
CCDC12-213ENST00000605875 UBN1Q9NPG3 1134 aa20.18■□□□□ 0.82
CCDC12-213ENST00000605875 C2orf16Q68DN1 1984 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 C2CD2LO14523 706 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 ERLIN2O94905 339 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 SOD2P04179 222 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 TRAPPC10P48553 1259 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 RARRES1P49788 294 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 POTEGQ6S5H5 508 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 SMG8Q8ND04 991 aaKnown RBP20.17■□□□□ 0.82
CCDC12-213ENST00000605875 PIGOQ8TEQ8 1089 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 ANKEF1Q9NU02 776 aa20.17■□□□□ 0.82
CCDC12-213ENST00000605875 USP34Q70CQ2 3546 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 A0A087WWV3 80 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 USO1O60763 962 aaKnown RBP20.16■□□□□ 0.82
CCDC12-213ENST00000605875 MED24O75448 989 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 URODP06132 367 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 SPATA31C1P0DKV0 1188 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 U2AF2P26368 475 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCDC12-213ENST00000605875 OR1G1P47890 313 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 CLCN5P51795 746 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 C15orf39Q6ZRI6 1047 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 ASAP3Q8TDY4 903 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 HERC2P3Q9BVR0 1158 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 EIF2AQ9BY44 585 aaKnown RBP20.16■□□□□ 0.82
CCDC12-213ENST00000605875 MARCH5Q9NX47 278 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 SSX2IPQ9Y2D8 614 aa20.16■□□□□ 0.82
CCDC12-213ENST00000605875 PRG3Q9Y2Y8 225 aaPredicted RBP20.16■□□□□ 0.82
CCDC12-213ENST00000605875 KIF3AQ9Y496 699 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms