RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 MARCH5Q9NX47 278 aa17.27■□□□□ 0.36
NEDD8-MDP1-204ENST00000605847 RAB23Q9ULC3 237 aa17.27■□□□□ 0.36
NEDD8-MDP1-204ENST00000605847 OTOGLQ3ZCN5 2332 aa17.27■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ZBTB43O43298 467 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 FUT2Q10981 343 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 RSPO2Q6UXX9 243 aaPredicted RBP17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 KSR1Q8IVT5 923 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 RIT2Q99578 217 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 JPH2Q9BR39 696 aaPredicted RBP17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SH2D3AQ9BRG2 576 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NIFKQ9BYG3 293 aaKnown RBP17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LTB4R2Q9NPC1 389 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CDH7Q9ULB5 785 aa17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MTF2Q9Y483 593 aaPredicted RBP17.26■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 GOLGA8AA7E2F4 631 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 GOLGA8BA8MQT2 603 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SLC27A2O14975 620 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MAFO75444 373 aaPredicted RBP17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PAPLNO95428 1278 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ITGA4P13612 1032 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CD72P21854 359 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CIITAP33076 1130 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CREMQ03060 361 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 COL9A3Q14050 684 aaPredicted RBP17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PPM1JQ5JR12 505 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LRCH2Q5VUJ6 765 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 GRASPQ7Z6J2 395 aaPredicted RBP17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 COLGALT2Q8IYK4 626 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 UNC45AQ9H3U1 944 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ESYT2A0FGR8 921 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 TMEM150BA6NC51 233 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MSH4O15457 936 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LILRB5O75023 590 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ZMYND10O75800 440 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 GNA11P29992 359 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 USP41Q3LFD5 358 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 RNF168Q8IYW5 571 aaPredicted RBP17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NETO1Q8TDF5 533 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NELL2Q99435 816 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 COLEC11Q9BWP8 271 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 IFT122Q9HBG6 1241 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CHST7Q9NS84 486 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 FNIP2Q9P278 1114 aa17.24■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PFKFB3Q16875 520 aaPredicted RBP17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LIN9Q5TKA1 542 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 RDM1Q8NG50 284 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LENG9Q96B70 501 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 B3GALT6Q96L58 329 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 FAM126AQ9BYI3 521 aaPredicted RBP17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 POLIQ9UNA4 740 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 COL4A3BPQ9Y5P4 624 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MIA3Q5JRA6 1907 aa17.23■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ARL5CA6NH57 179 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 KCNA4P22459 653 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 TGM1P22735 817 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MLH1P40692 756 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NRLP54845 237 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SPEM2Q0P670 501 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PPP2R5DQ14738 602 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 FUT10Q6P4F1 479 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LILRA6Q6PI73 481 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 TPRG1Q6ZUI0 275 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 GPR65Q8IYL9 337 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 NELL1Q92832 810 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 FGF13Q92913 245 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 CEP89Q96ST8 783 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PARD6AQ9NPB6 346 aa17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 MRPS17Q9Y2R5 130 aaKnown RBP17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.22■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 XYLBO75191 536 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ERLIN2O94905 339 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 EFEMP2O95967 443 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SRGAP2CP0DJJ0 459 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 RPL17P18621 184 aaKnown RBP17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 RPS9P46781 194 aaKnown RBP17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SCNN1GP51170 649 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 DSC1Q08554 894 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 DMWDQ09019 674 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 PPM1LQ5SGD2 360 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 UBXN11Q5T124 520 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 ZNF852Q6ZMS4 543 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 SLC5A5Q92911 643 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 GAD1Q99259 594 aa17.21■□□□□ 0.35
NEDD8-MDP1-204ENST00000605847 KXD1Q9BQD3 176 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms