RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 FGF14Q92915 247 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GJA10Q969M2 543 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 B3GALT6Q96L58 329 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CEP89Q96ST8 783 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RTKNQ9BST9 563 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PRKD2Q9BZL6 878 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 EPC1Q9H2F5 836 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 UNC45AQ9H3U1 944 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZDHHC7Q9NXF8 308 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 KANSL3Q9P2N6 904 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FAM170BA6NMN3 283 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GOLGA8AA7E2F4 631 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GOLGA8BA8MQT2 603 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GAS2O43903 313 aaKnown RBP13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PAPLNO95428 1278 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ADRB1P08588 477 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FSHRP23945 695 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SFNP31947 248 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CIITAP33076 1130 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DSG1Q02413 1049 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PFKFB3Q16875 520 aaPredicted RBP13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 XKR3Q5GH77 459 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 UBXN11Q5T124 520 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RIT2Q99578 217 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 NIFKQ9BYG3 293 aaKnown RBP13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 C6orf50Q9HD87 102 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZSCAN32Q9NX65 697 aa13.21□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ESYT2A0FGR8 921 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 EFEMP2O95967 443 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CD72P21854 359 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NTHL1P78549 312 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SLC44A4Q53GD3 710 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LRCH2Q5VUJ6 765 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TSSK4Q6SA08 328 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 COLGALT2Q8IYK4 626 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CCDC136Q96JN2 1154 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TEKT3Q9BXF9 490 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PARD6AQ9NPB6 346 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZFP37Q9Y6Q3 630 aaPredicted RBP13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 BAHCC1Q9P281 2608 aa13.2□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZFYVE26Q68DK2 2539 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LILRB5O75023 590 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZMYND10O75800 440 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 STBD1O95210 358 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NCLP19338 710 aaKnown RBP13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TGM1P22735 817 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CDC27P30260 824 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MLH1P40692 756 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PRKCQQ04759 706 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MIER3Q7Z3K6 550 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SLC5A5Q92911 643 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MINDY3Q9H8M7 445 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LTB4R2Q9NPC1 389 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 GMEB2Q9UKD1 530 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
PDLIM1P1-201ENST00000604187 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NR1I2O75469 434 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 C1RP00736 705 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ITGA4P13612 1032 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MAGEA9P43362 315 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SCNN1GP51170 649 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 DSC1Q08554 894 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PPM1JQ5JR12 505 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZBTB41Q5SVQ8 909 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LILRA6Q6PI73 481 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MTSS1LQ765P7 747 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NELL1Q92832 810 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 FGF13Q92913 245 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CHAMP1Q96JM3 812 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 GAD1Q99259 594 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 KXD1Q9BQD3 176 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 GPR62Q9BZJ7 368 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms