RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TTC3P53804 2025 aa11.06□□□□□ -0.64
UPF1-213ENST00000601981 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 PRKCBP05771 671 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 MAPTP10636 758 aaKnown RBP11.05□□□□□ -0.64
UPF1-213ENST00000601981 SKIP12755 728 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 MBTD1Q05BQ5 628 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 ALCAMQ13740 583 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 GPNMBQ14956 572 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 FAM187BQ17R55 369 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 HERC4Q5GLZ8 1057 aaPredicted RBP11.05□□□□□ -0.64
UPF1-213ENST00000601981 KLHL10Q6JEL2 608 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 NOTUMQ6P988 496 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 ZSCAN30Q86W11 494 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 SMYD4Q8IYR2 804 aaPredicted RBP11.05□□□□□ -0.64
UPF1-213ENST00000601981 TDHQ8IZJ6 230 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 DAW1Q8N136 415 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 BSNDQ8WZ55 320 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 DNAJC19Q96DA6 116 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 CCDC51Q96ER9 411 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 MED15Q96RN5 788 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 SLC9A7Q96T83 725 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 NTPCRQ9BSD7 190 aaKnown RBP11.05□□□□□ -0.64
UPF1-213ENST00000601981 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 AGO3Q9H9G7 860 aaKnown RBP11.05□□□□□ -0.64
UPF1-213ENST00000601981 MRPL44Q9H9J2 332 aaKnown RBP11.05□□□□□ -0.64
UPF1-213ENST00000601981 FANCLQ9NW38 375 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
UPF1-213ENST00000601981 ACKR2O00590 384 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 PSMA7O14818 248 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 SLC16A4O15374 487 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 STAG3L1P0CL83 205 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 ATP1A3P13637 1013 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 PRCPP42785 496 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 RAB27AP51159 221 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 NCKAP1LP55160 1127 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 EHHADHQ08426 723 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 PSMD2Q13200 908 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 PRPF4BQ13523 1007 aaKnown RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 CDKAL1Q5VV42 579 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 TWF2Q6IBS0 349 aaKnown RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 HAUS6Q7Z4H7 955 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 SFR1Q86XK3 245 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 DRC7Q8IY82 874 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 HACE1Q8IYU2 909 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 NELFBQ8WX92 580 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 HVCN1Q96D96 273 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 ADPGKQ9BRR6 497 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 XPO4Q9C0E2 1151 aaKnown RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
UPF1-213ENST00000601981 POLD4Q9HCU8 107 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 AGPAT5Q9NUQ2 364 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 IFNKQ9P0W0 207 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 ARHGAP28Q9P2N2 729 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 EXOC7Q9UPT5 735 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 CITO14578 2027 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 CNTNAP2Q9UHC6 1331 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 GBF1Q92538 1859 aa11.04□□□□□ -0.64
UPF1-213ENST00000601981 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 FRMD3A2A2Y4 597 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 ESPNB1AK53 854 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 N4BP3O15049 544 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 TSPAN1O60635 241 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 CSDE1O75534 798 aaKnown RBP11.03□□□□□ -0.64
UPF1-213ENST00000601981 KIF20AO95235 890 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 SERPINC1P01008 464 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 FGFR4P22455 802 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 EPHB4P54760 987 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 WDR5P61964 334 aaKnown RBP11.03□□□□□ -0.64
UPF1-213ENST00000601981 SPAG1Q07617 926 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 COASYQ13057 564 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 SHHQ15465 462 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 SLC24A5Q71RS6 500 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 C16orf59Q7L2K0 433 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 TMEM161BQ8NDZ6 487 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
UPF1-213ENST00000601981 BICD1Q96G01 975 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 ADAM2Q99965 735 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 KIFC3Q9BVG8 833 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 PRO3102Q9H379 93 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 FZD8Q9H461 694 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 ST6GALNAC4Q9H4F1 302 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 MINDY3Q9H8M7 445 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 RGS18Q9NS28 235 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 IMPACTQ9P2X3 320 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 ZKSCAN5Q9Y2L8 839 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 A0A0C4DFX4 3053 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 ADGRA3Q8IWK6 1321 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 COL6A3P12111 3177 aa11.03□□□□□ -0.64
UPF1-213ENST00000601981 BICDL2A1A5D9 508 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms