RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 GLUD2P49448 558 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 POU5F1BQ06416 359 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 TOB2Q14106 344 aaPredicted RBP10.67□□□□□ -0.7
VRK3-224ENST00000601849 NCAPH2Q6IBW4 605 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 KANK3Q6NY19 840 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 FERMT3Q86UX7 667 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 SKAP1Q86WV1 359 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 SNX27Q96L92 541 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 LXNQ9BS40 222 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 PHF20Q9BVI0 1012 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 PLEKHA4Q9H4M7 779 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 MAN1C1Q9NR34 630 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.67□□□□□ -0.7
VRK3-224ENST00000601849 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
VRK3-224ENST00000601849 PCDHA12Q9UN75 941 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 KCNJ14Q9UNX9 436 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 GIT1Q9Y2X7 761 aa10.67□□□□□ -0.7
VRK3-224ENST00000601849 ARL5CA6NH57 179 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 MEIS3P2A8K0S8 358 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 SLC37A4O43826 429 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 TADA2AO75478 443 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 DGAT1O75907 488 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 HOXA11P31270 313 aaPredicted RBP10.66□□□□□ -0.7
VRK3-224ENST00000601849 EMC2Q15006 297 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 ANKRD1Q15327 319 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 USP41Q3LFD5 358 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 PIK3AP1Q6ZUJ8 805 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 DYDC2Q96IM9 177 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 HERC2P3Q9BVR0 1158 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 RHOBTB2Q9BYZ6 727 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 CSRNP2Q9H175 543 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 SEMA4AQ9H3S1 761 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 WDR6Q9NNW5 1121 aaKnown RBP10.66□□□□□ -0.7
VRK3-224ENST00000601849 WNT16Q9UBV4 365 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 DUSP12Q9UNI6 340 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 PRG3Q9Y2Y8 225 aaPredicted RBP10.66□□□□□ -0.7
VRK3-224ENST00000601849 IPPQ9Y573 584 aa10.66□□□□□ -0.7
VRK3-224ENST00000601849 ZFHX2Q9C0A1 2572 aaPredicted RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 INPPL1O15357 1258 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 LILRB3O75022 631 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 PTENP60484 403 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 TRIM29Q14134 588 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 CTTNQ14247 550 aaKnown RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 GPR65Q8IYL9 337 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 SIX5Q8N196 739 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 KCNG4Q8TDN1 519 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 BCL7CQ8WUZ0 217 aaPredicted RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 SMG7Q92540 1137 aaKnown RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 GAD1Q99259 594 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 APOL6Q9BWW8 343 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 RXFP1Q9HBX9 757 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 ANKEF1Q9NU02 776 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 ZDHHC7Q9NXF8 308 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 RGL1Q9NZL6 768 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 ZFP37Q9Y6Q3 630 aaPredicted RBP10.65□□□□□ -0.7
VRK3-224ENST00000601849 CFAP54Q96N23 3096 aa10.65□□□□□ -0.7
VRK3-224ENST00000601849 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 KMT2EQ8IZD2 1858 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 ZDBF2Q9HCK1 2354 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 PRR23AA6NEV1 266 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 TEX28O15482 410 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 EIF5BO60841 1220 aaKnown RBP10.64□□□□□ -0.71
VRK3-224ENST00000601849 SLITRK3O94933 977 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 XRCC6P12956 609 aaKnown RBP eCLIP10.64□□□□□ -0.71
VRK3-224ENST00000601849 KRT2P35908 639 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 MLH1P40692 756 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 DSG1Q02413 1049 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 CYP4A11Q02928 519 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 UBXN11Q5T124 520 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 KIAA0319Q5VV43 1072 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 PALB2Q86YC2 1186 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
VRK3-224ENST00000601849 DTWD2Q8NBA8 298 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 SMG8Q8ND04 991 aaKnown RBP10.64□□□□□ -0.71
VRK3-224ENST00000601849 AIFM3Q96NN9 605 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 NFKBIZQ9BYH8 718 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 SMOC2Q9H3U7 446 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 FNIP2Q9P278 1114 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 PARP2Q9UGN5 583 aa10.64□□□□□ -0.71
VRK3-224ENST00000601849 CLUHO75153 1309 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 WDR81Q562E7 1941 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 TSPAN1O60635 241 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 CFHP08603 1231 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 SRFP11831 508 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 SCNN1GP51170 649 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 AFF1P51825 1210 aaKnown RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 SCRN1Q12765 414 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 ANGPT1Q15389 498 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 NPY5RQ15761 445 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 CALCRLQ16602 461 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 PDXDC1Q6P996 788 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms