RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 MAPK6Q16659 721 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 EEF1DP3Q658K8 133 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 DEPTORQ8TB45 409 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 BCL7CQ8WUZ0 217 aaPredicted RBP19.31■□□□□ 0.68
IRF3-230ENST00000601809 MRPS27Q92552 414 aaKnown RBP19.31■□□□□ 0.68
IRF3-230ENST00000601809 KCNN1Q92952 543 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 PABPC5Q96DU9 382 aaKnown RBP19.31■□□□□ 0.68
IRF3-230ENST00000601809 EPSTI1Q96J88 318 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 IFT74Q96LB3 600 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 CLIC6Q96NY7 704 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 C17orf75Q9HAS0 396 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 MIOSQ9NXC5 875 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 KCND2Q9NZV8 630 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 DNAJB4Q9UDY4 337 aa19.31■□□□□ 0.68
IRF3-230ENST00000601809 NPTXRO95502 500 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 GALTP07902 379 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 ITGA4P13612 1032 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 GTF2F1P35269 517 aaKnown RBP eCLIP19.3■□□□□ 0.684e-10■■■■■ 32.8
IRF3-230ENST00000601809 PPM1AP35813 382 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 UBA7P41226 1012 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 KCNQ1P51787 676 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 EFNA5P52803 228 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 PEX3P56589 373 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 NCBP1Q09161 790 aaKnown RBP19.3■□□□□ 0.68
IRF3-230ENST00000601809 PKP1Q13835 747 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 SPECC1Q5M775 1068 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 THNSL1Q8IYQ7 743 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 LINC00301Q8NCQ3 95 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 DRC1Q96MC2 740 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 TMEM134Q9H6X4 195 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 UBN1Q9NPG3 1134 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 TLR9Q9NR96 1032 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 SPG21Q9NZD8 308 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 INPP5FQ9Y2H2 1132 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 GIT1Q9Y2X7 761 aa19.3■□□□□ 0.68
IRF3-230ENST00000601809 PHLPP2Q6ZVD8 1323 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 NPHP3-ACAD11A0A0J9YXS1 232 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 ARL5CA6NH57 179 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 SFI1A8K8P3 1242 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 NT5C1B-RDH14C9J2C7 533 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 ABLIM1O14639 778 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 EFEMP2O95967 443 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 SLC11A1P49279 550 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 DSC1Q08554 894 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 PRPF4BQ13523 1007 aaKnown RBP19.29■□□□□ 0.68
IRF3-230ENST00000601809 RAD54LQ92698 747 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 SYMPKQ92797 1274 aaKnown RBP19.29■□□□□ 0.68
IRF3-230ENST00000601809 CALML4Q96GE6 196 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 GAD1Q99259 594 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 VN1R3Q9BXE9 311 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 PTPRHQ9HD43 1115 aa19.29■□□□□ 0.68
IRF3-230ENST00000601809 TCF20Q9UGU0 1960 aaKnown RBP19.28■□□□□ 0.68
IRF3-230ENST00000601809 N4BP3O15049 544 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 ZC3H11AO75152 810 aaKnown RBP eCLIP19.28■□□□□ 0.681e-11■□□□□ 11.2
IRF3-230ENST00000601809 ZSCAN22P10073 491 aaPredicted RBP19.28■□□□□ 0.68
IRF3-230ENST00000601809 PDIA4P13667 645 aaKnown RBP19.28■□□□□ 0.68
IRF3-230ENST00000601809 PLS3P13797 630 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 MLH1P40692 756 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 ZNF131P52739 623 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 CEBPZQ03701 1054 aaKnown RBP19.28■□□□□ 0.68
IRF3-230ENST00000601809 KCNC3Q14003 757 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 MCM6Q14566 821 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 COLGALT2Q8IYK4 626 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 TMEM161BQ8NDZ6 487 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.28■□□□□ 0.68
IRF3-230ENST00000601809 IGSF21Q96ID5 467 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 CDK5RAP3Q96JB5 506 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 ZFP42Q96MM3 310 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 FIZ1Q96SL8 496 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 KANSL3Q9P2N6 904 aa19.28■□□□□ 0.68
IRF3-230ENST00000601809 A0A087X0B3 334 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 LINC01565O15544 149 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 CSPG5O95196 566 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 GLP2RO95838 553 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 F13A1P00488 732 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 PROZP22891 400 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 AKAP5P24588 427 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 DLX2Q07687 328 aaPredicted RBP19.27■□□□□ 0.68
IRF3-230ENST00000601809 RAD51AP2Q09MP3 1159 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 DMP1Q13316 513 aaPredicted RBP19.27■□□□□ 0.68
IRF3-230ENST00000601809 ADAM15Q13444 863 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 PDE12Q6L8Q7 609 aaKnown RBP19.27■□□□□ 0.68
IRF3-230ENST00000601809 URGCPQ8TCY9 931 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 ACO2Q99798 780 aaKnown RBP19.27■□□□□ 0.68
IRF3-230ENST00000601809 REEP2Q9BRK0 252 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 TMEM175Q9BSA9 504 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 CXCL16Q9H2A7 254 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 ODF2LQ9ULJ1 636 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 TNFSF13BQ9Y275 285 aa19.27■□□□□ 0.68
IRF3-230ENST00000601809 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
IRF3-230ENST00000601809 CARNS1A5YM72 827 aa19.26■□□□□ 0.67
IRF3-230ENST00000601809 K7ERI5 159 aa19.26■□□□□ 0.67
IRF3-230ENST00000601809 DLL1O00548 723 aa19.26■□□□□ 0.67
IRF3-230ENST00000601809 NCK2O43639 380 aa19.26■□□□□ 0.67
IRF3-230ENST00000601809 TBX10O75333 385 aa19.26■□□□□ 0.67
IRF3-230ENST00000601809 POMCP01189 267 aa19.26■□□□□ 0.67
IRF3-230ENST00000601809 SSBP05455 408 aaKnown RBP eCLIP19.26■□□□□ 0.67
IRF3-230ENST00000601809 DDIT3P35638 169 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms